RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Kdelr2Q9CQM2 212 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dram2Q9CR48 267 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Emc2Q9CRD2 297 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gemin6Q9CX53 166 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Qrsl1Q9CZN8 525 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Fam174aQ9D3L0 190 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 4933407L21RikQ9D476 131 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Maged1Q9QYH6 775 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ptges3Q9R0Q7 160 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Clic1Q9Z1Q5 241 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Fbxw27A0A1D5RLF0 466 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr243E9PV96 316 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Vmn1r77E9PY60 306 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Cldn34aG3UW52 211 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr628K7N6B2 316 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Vmn2r124K7N789 855 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm4758L7N258 96 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hs3st1O35310 311 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 HpnO35453 436 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ppef1O35655 650 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Sp100O35892 482 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Chrna4O70174 629 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 B2mP01887 119 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Rag2P21784 527 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ptger3P30557 365 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Opn1swP51491 346 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Khdc4Q3TCX3 612 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 P2rx5Q3UYI1 455 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tm4sf1Q64302 202 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gpsm1Q6IR34 673 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Osgepl1Q6PEB4 414 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Zfp790Q80ZX2 779 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Slc5a7Q8BGY9 580 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Nup54Q8BTS4 510 aaKnown RBP9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Sh3rf2Q8BZT2 735 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Map2k7Q8CE90 535 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Osbpl11Q8CI95 751 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 B3gnt8Q8R3I9 389 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Pla2g16Q8R3U1 162 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 TpbpbQ9CQC0 121 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Q9CQT6 229 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Cndp2Q9D1A2 475 aaKnown RBP9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Q9D1F3 157 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ephx1Q9D379 455 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 4930524N10RikQ9D519 233 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Nusap1Q9ERH4 427 aaKnown RBP9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Nkain4Q9JMG4 208 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hapln1Q9QUP5 356 aaKnown RBP9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 St6galnac4Q9R2B6 360 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm11549A0A286YD83 63 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm21904A8HG57 180 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm12800B1AUV4 484 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Catsperg1E9Q355 1151 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Vmn1r25H3BLP0 302 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm21866J3QMH4 180 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 NnmtO55239 264 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 MpoP11247 718 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Timp2P25785 220 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 FaslgP41047 279 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Rfx3P48381 749 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 SnrpgP62309 76 aaKnown RBP9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Mmp11Q02853 492 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 CenplQ3U3S3 329 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 PkdccQ5RJI4 492 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Irf4Q64287 450 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Acot5Q6Q2Z6 421 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tha1Q6XPS7 400 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dsg1cQ7TSF0 911 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Slc26a11Q80ZD3 593 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Asrgl1Q8C0M9 326 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Krt33aQ8K0Y2 404 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Atat1Q8K341 421 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Med17Q8VCD5 649 aaKnown RBP9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Efcab7Q8VDY4 628 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 DgkgQ91WG7 788 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dok4Q99KE3 325 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ly6kQ9CWP4 154 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tmem138Q9D6G5 162 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Plxdc2Q9DC11 530 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 PorcnQ9JJJ7 461 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 SpastQ9QYY8 614 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Atp6ap1Q9R1Q9 463 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Minpp1Q9Z2L6 481 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr1023A2ASU6 311 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Otud3B1AZ99 396 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2abC0HKE1 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2acC0HKE2 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2adC0HKE3 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2aeC0HKE4 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2agC0HKE5 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2aiC0HKE6 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2anC0HKE7 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2aoC0HKE8 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hist1h2apC0HKE9 130 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 4930455H04RikD3Z622 58 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr571E9Q407 322 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 2610001J05RikF2Z3Y9 59 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 FpgtG5E8F4 590 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Slc6a20bO88575 635 aa9.23□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Slc6a18O88576 615 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms