RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ssxb1Q9CPU1 170 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 MmachcQ9CZD0 279 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Calr3Q9D9Q6 380 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Galnt16Q9JJ61 558 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tas2r103Q9JKA3 312 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Kcnj10Q9JM63 379 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 ClnkQ9QZE2 435 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Dlc1Q9R0Z9 1092 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 PtgfrnQ9WV91 879 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Csmd2V9GX34 3611 aa11.2□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Myo18bE9PV66 2605 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Olfr1082A0A1L1SUC9 313 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gm14401A2ARV7 303 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Olfr1328B1ARV2 313 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 UprtB1AVZ0 310 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Arhgap40E9Q6X9 672 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Vmn2r52L7N2B2 852 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 EsrraO08580 422 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Psmb1O09061 240 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Casq2O09161 415 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 P03976 113 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 GrnP28798 589 aaKnown RBP11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 ThpoP40226 356 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Pxmp2P42925 194 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 DbtP53395 482 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Dcaf7P61963 342 aaKnown RBP11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Galnt3P70419 633 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Lypla1P97823 230 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Abraxas2Q3TCJ1 415 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Alg10bQ3UGP8 474 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ppp1r13lQ5I1X5 824 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Epha1Q60750 977 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Prkg2Q61410 762 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Itga2Q62469 1178 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 BocQ6AZB0 1110 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gga2Q6P5E6 603 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 TwistnbQ78WZ7 330 aaKnown RBP11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Exosc3Q7TQK4 274 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 2610318N02RikQ80VT5 305 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 MtdhQ80WJ7 579 aaKnown RBP11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Thoc5Q8BKT7 683 aaKnown RBP11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Rap2cQ8BU31 183 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 IlvblQ8BU33 632 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Cpne1Q8C166 536 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Q8C1R3 189 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Phf21bQ8C966 487 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Reep4Q8K072 257 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Cd177Q8R2S8 817 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Mgat5Q8R4G6 740 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gys2Q8VCB3 704 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ogfrl1Q8VE52 464 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Slc7a13Q91WN3 478 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Imp3Q921Y2 184 aaKnown RBP11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Neurl1Q923S6 574 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 4930550L24RikQ99PA7 320 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Psmd9Q9CR00 222 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 B3gat1Q9CW73 334 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 3100002H09RikQ9CXW6 140 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tmem178aQ9CZ16 297 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Bcas2Q9D287 225 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Slc46a3Q9DC26 460 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Olig2Q9EQW6 323 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Hapln2Q9ESM3 341 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Krt71Q9R0H5 524 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Phf1Q9Z1B8 559 aa11.19□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ttc28Q80XJ3 2450 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Adgrg4B7ZCC9 3073 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 CN725425A0A087WRU1 652 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Igkv6-23A0A140T8N5 115 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gm11634A0A1B0GSX1 172 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Olfr600E9PUN7 314 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Btbd2E9PUS2 523 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gm9008E9PVG0 424 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gm8374L7N2A9 172 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Emp3O35912 163 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Art2bO35975 289 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Zfand5O88878 213 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ces1cP23953 554 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tnfrsf1bP25119 474 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Klf16P58334 251 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Abce1P61222 599 aaKnown RBP11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Hsd17b3P70385 305 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 MpgQ04841 333 aaKnown RBP11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Nr4a2Q06219 598 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Treml2Q2LA85 329 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Defb33Q30KN3 62 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Q32M26 199 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Fthl17dQ3SXD1 176 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tmem120bQ3TA38 339 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ap5b1Q3TAP4 876 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Usp39Q3TIX9 564 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 TchpQ3TVW5 497 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 BtrcQ3ULA2 605 aaKnown RBP11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tmem171Q4KL18 322 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Mup20Q5FW60 181 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Prg2Q61878 223 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Trim46Q7TNM2 759 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 SnphQ80U23 495 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Kiaa1456Q80WQ4 447 aa11.18□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Eif4e2Q8BMB3 245 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms