RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Pafah2Q8VDG7 390 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1391Q8VFA4 311 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr683Q8VGV1 319 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Sp2Q9D2H6 612 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Psg23Q9D2U0 471 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 4933421I07RikQ9D420 214 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Izumo2Q9DA16 220 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fank1Q9DAM9 344 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Psg21Q9DAV5 471 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 GhrlQ9EQX0 117 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tsga8Q9JJL0 238 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm28961A0A087WPA5 222 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm21858A0A087WQ24 222 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Dcaf4A0A1Y7VNZ0 532 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 4932443I19RikA0A286YE38 169 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ccdc149F6V035 524 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zfp607bG3X9H3 648 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 TertO70372 1122 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 TyrP11344 533 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 TrhrP21761 393 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Rin3P59729 980 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 AbatP61922 500 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Eef1a2P62631 463 aaKnown RBP9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Art5P70352 309 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Malt1Q2TBA3 832 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Itgb2lQ3UV74 738 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Mtmr11Q3V1L6 700 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Runx3Q64131 409 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Unc119bQ8C4B4 251 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 C1rbQ8CFG9 706 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 RfkQ8CFV9 155 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Saysd1Q8K190 188 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 FevQ8QZW2 237 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Vmn1r81Q8R286 306 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Chrna3Q8R4G9 499 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 FggQ8VCM7 436 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Klhl22Q99JN2 634 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Bud23Q9CY21 281 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Mdm1Q9D067 708 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Arpc5lQ9D898 153 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Lpar3Q9EQ31 354 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ankrd12G5E893 2041 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zfp383A0A087WRR7 490 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 IghdA0A0A6YW14 291 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 P01665 111 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 P01666 111 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cyp17a1P27786 507 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Adrb1P34971 466 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Rpl6P47911 296 aaKnown RBP9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 MazP56671 477 aaKnown RBP9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Apoc2Q05020 97 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Vwa5b2Q3UR50 1248 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 PtprcapQ64697 197 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Foxb2Q64733 428 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Crb2Q80YA8 1282 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Vangl1Q80Z96 526 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Samd14Q8K070 417 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 H2afjQ8R1M2 129 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ffar2Q8VCK6 330 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1052Q8VGR8 312 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cox4i2Q91W29 172 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Pcyt2Q922E4 404 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Grip1Q925T6 1127 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Krt88Q9CPR6 171 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gpn3Q9D3W4 284 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Sh3bgrlQ9JJU8 114 aaKnown RBP9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 ChmlQ9QZD5 621 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Spaca5A2AE20 160 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Trmt1lA2RSY6 728 aaKnown RBP9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Hpse2B2RY83 592 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Serpina3jD3Z451 420 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm8906L7N2A2 181 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Pbx2O35984 430 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 NnmtO55239 264 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cmpk2Q3U5Q7 447 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Scgb1c1Q7M742 95 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Orai1Q8BWG9 304 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 McatQ8R3F5 381 aaKnown RBP9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr551Q8VG23 315 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc25a37Q920G8 338 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Timm22Q9CQ85 194 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Yif1bQ9CX30 311 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Hspb11Q9D6H2 143 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Mettl15Q9DCL4 406 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc38a3Q9DCP2 505 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Wdr61Q9ERF3 305 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 NsdhlQ9R1J0 362 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fem1aaQ9Z2G1 654 aa9.22□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Igkv5-39A0A0G2JDV4 115 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 TomtA1Y9I9 258 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Vmn2r98E9PZ56 857 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Sult3a2G5E904 293 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gtpbp1O08582 668 aaKnown RBP9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Hax1O35387 280 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 FurinP23188 793 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 JupQ02257 745 aaKnown RBP9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Col19a1Q0VF58 1136 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc2a6Q3UDF0 497 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 EgflamQ4VBE4 1017 aa9.21□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cdkn2dQ60773 166 aa9.21□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms