RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Gm5460Q3UQ97 254 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Hepacam2Q4VAH7 463 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cxcl17Q5UW37 119 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr270Q7TS19 314 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Rpp38Q80UU2 280 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Trmt12Q8BG71 446 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 SynbQ8BI41 618 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Chpt1Q8C025 398 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Lrrn3Q8CBC6 707 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Esrp2Q8K0G8 717 aaKnown RBP9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Vmn1r30Q8R2D2 302 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cacng6Q8VHW3 260 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Sfxn1Q99JR1 322 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cmtm8Q9CZR4 173 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Ccdc54Q9DAL3 329 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 PrelpQ9JK53 378 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm4131A0A140LJ24 318 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 5830411N06RikB3F5L4 1112 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm8159E9Q0R1 267 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Usp2O88623 613 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cdh11P55288 796 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Actc1P68033 377 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Acta1P68134 377 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Alg6Q3TAE8 507 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cfhr2Q4LDF6 332 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Nlgn2Q69ZK9 836 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Doxl2Q6IMK7 723 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Vmn2r81Q80Z09 865 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Mblac2Q8BL86 279 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Slc22a22Q8R0S9 554 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Phospho1Q8R2H9 267 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Otud7aQ8R554 926 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gtpbp8Q9CY28 285 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tprg1lQ9DBS2 266 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Nectin1Q9JKF6 515 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 TsnaxQ9QZE7 290 aaKnown RBP9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Ccl26F8VQM2 93 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Hoxb6P09023 224 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Defb48Q3UW22 87 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Dsg1cQ7TSF0 911 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cept1Q8BGS7 416 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Q8CF31 99 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr202Q8VGQ3 307 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Steap1Q9CWR7 339 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gde1Q9JL56 331 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Loxl3Q9Z175 754 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Col3a1P08121 1464 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tex13aA2AFS9 377 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Omt2aF6ZJR3 104 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Atpif1O35143 106 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tmco2P0C1V4 183 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Hmgn1P18608 96 aaKnown RBP9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Rln1P47932 185 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Nr4a2Q06219 598 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Ankub1Q3UUE9 192 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Six4Q61321 775 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr1033Q8VFK5 310 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Itfg2Q91WI7 443 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Klhdc8aQ91XA8 350 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Elmod3Q91YP6 381 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Pdzk1Q9JIL4 519 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Hebp2Q9WU63 205 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Ccdc88aQ5SNZ0 1873 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Pde4dipQ80YT7 2224 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 CerklA2AQH1 525 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Mettl8A2AUU0 281 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Vmn1r25H3BLP0 302 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr190K7N5T5 307 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Bard1O70445 765 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Ccr7P47774 378 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 AdprhP54923 362 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Lefty2P57785 368 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Dnajc5P60904 198 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 SetmarQ80UJ9 309 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Sp110Q8BVK9 445 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Mtfr2Q8VED8 361 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr729Q8VET4 323 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr350Q8VFP8 312 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Hrh4Q91ZY2 391 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 AdprmQ99KS6 340 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Fam96bQ9D187 163 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Aaed1Q9D1A0 226 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Borcs8Q9D6Y4 120 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Sult1c2Q9D939 296 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Asic5Q9R0Y1 495 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Acbd4E9Q289 327 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Rnpepl1G5E872 720 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Dnajb3O35723 242 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gmeb2P58929 530 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Glycam1Q02596 151 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tm7sf2Q71KT5 418 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr1463Q7TQR3 310 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 ManbaQ8K2I4 879 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gtpbp3Q923K4 492 aa9.38□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm16432A0A0A6YXX9 775 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm42688A0A0R3P9D1 673 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 A0A1L1SV24 88 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr1193A2AV13 318 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm4969D3YZT1 566 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Vmn1r77E9PY60 306 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms