RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Sra1Q80VJ2 232 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Mal2Q8BI08 175 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ptges2Q8BWM0 384 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 TapbplQ8VD31 451 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr1461Q8VEV7 312 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ndufs4Q9CXZ1 175 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Exosc7Q9D0M0 291 aaKnown RBP17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Phf6Q9D4J7 364 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Actl11Q9D5V1 1207 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm42715A0A087WP63 3095 aaKnown RBP17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm8251F6VUT6 1994 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ankrd12G5E893 2041 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm29106A0A087WSP8 697 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm14744B1AVU4 173 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr619E9PV95 320 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cldn4O35054 210 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Csf2P01587 141 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Prph2P15499 346 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Etv1P41164 477 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gpr143P70259 405 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Taar7fQ5QD08 358 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ripk1Q60855 656 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Elmod2Q8BGF6 293 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Poglut1Q8BYB9 392 aaKnown RBP17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Padi6Q8K3V4 682 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Fahd1Q8R0F8 227 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tmem268Q8R239 342 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 NagsQ8R4H7 527 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr586Q8VH13 317 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Mrgprb4Q91ZC0 321 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Etv5Q9CXC9 510 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 5430402E10RikQ9D3N5 173 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Kcnk7Q9Z2T1 307 aa17.7■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zfp433A0A0J9YUD4 600 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm13539A0A1B0GSM6 183 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm32687A0A1W2P6H7 600 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tmem201A2A8U2 664 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zfp993A2A8V4 313 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Kctd17E0CYQ0 296 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ccdc149F6V035 524 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm3476K7N6V0 257 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr209L7N1X3 305 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cd83O88324 196 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tbx1P70323 479 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Plpp4Q0VBU9 271 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Nell1Q2VWQ2 810 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Entpd7Q3TCT4 606 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Morn4Q6PGF2 146 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Kcnk12Q76M80 430 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr871Q7TRF0 311 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 FlcnQ8QZS3 579 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr572Q8VGZ3 318 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Igkv10-95A0A0G2JFY3 115 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Otud4B2RRE7 1107 aaKnown RBP17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Prr36E9PV26 1098 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm609E9Q573 300 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Adam3F8VQ03 822 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Atp1b1P14094 304 aaKnown RBP17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Itgb7P26011 806 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ccr3P51678 359 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 CpeQ00493 476 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Szrd1Q6NXN1 152 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr1344Q7TQV3 321 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Spon2Q8BMS2 330 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tctn1Q8BZ64 593 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Serpina11Q8CIE0 424 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 NclnQ8VCM8 563 aaKnown RBP17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ogfrl1Q8VE52 464 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr170Q8VGL6 313 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Eif2b2Q99LD9 351 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Glipr1Q9CWG1 255 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Spns3Q9D232 514 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr938Q9EQ93 315 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Praf2Q9JIG8 178 aa17.69■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Wdr76A6PWY4 622 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zfp809G3X9G7 402 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ulk1O70405 1051 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Yap1P46938 488 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cdk5P49615 292 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Rab2bP59279 216 aaKnown RBP17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Elmod1Q3V1U8 326 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Nr2f1Q60632 422 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Meig1Q61845 88 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zswim9Q6DI92 447 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Otub1Q7TQI3 271 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Rgs7bpQ8BQP9 257 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ptpn7Q8BUM3 359 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cd207Q8VBX4 331 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Glyr1Q922P9 546 aaKnown RBP17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Igkv16-104A0A0B4J1I1 116 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 2610021A01RikE9Q0Q3 834 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Prdm14E9Q3T6 561 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Clcn7O70496 803 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Klrb1cP27814 223 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Hnrnpa1P49312 320 aaKnown RBP17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Pitx2P97474 317 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tmem248Q3TBN1 314 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Trappc13Q3TIR1 417 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zfp184Q7TSH9 737 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 BC024139Q8BVJ3 772 aa17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms