RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 FAM71E1Q6IPT2 247 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 MEX3BQ6ZN04 569 aaKnown RBP23.06■■□□□ 1.28
VEGFA-232ENST00000640653 C10orf107Q8IVU9 208 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 ACBD4Q8NC06 268 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 OR1J4Q8NGS1 313 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 OR2W6PQ8NHA6 318 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 NTNG2Q96CW9 530 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 APOPT1Q96IL0 206 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 METTL2AQ96IZ6 378 aaKnown RBP23.06■■□□□ 1.28
VEGFA-232ENST00000640653 TRMOQ9BU70 441 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 OSBPL11Q9BXB4 747 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 UCK2Q9BZX2 261 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 TNFRSF12AQ9NP84 129 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 MYNNQ9NPC7 610 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 KLRF1Q9NZS2 232 aa23.06■■□□□ 1.28
VEGFA-232ENST00000640653 NKX2-6A6NCS4 301 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 SLC28A1O00337 649 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 GNB5O14775 395 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 PLOD3O60568 738 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 TRIM13O60858 407 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 ABCB7O75027 752 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 UGT2B11O75310 529 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 ZFP36L2P47974 494 aaKnown RBP23.05■■□□□ 1.28
VEGFA-232ENST00000640653 VSNL1P62760 191 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 IFFO1Q0D2I5 559 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 PCLAFQ15004 111 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 TOMM20Q15388 145 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 CLEC6AQ6EIG7 209 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 NOXRED1Q6NXP6 359 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 ANGPTL8Q6UXH0 198 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 ULK2Q8IYT8 1036 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 TMBIM1Q969X1 311 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 TMCO6Q96DC7 493 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 COL21A1Q96P44 957 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 NODALQ96S42 347 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 ANKRA2Q9H9E1 313 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 TAS2R9Q9NYW1 312 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 DNAJC13O75165 2243 aa23.05■■□□□ 1.28
VEGFA-232ENST00000640653 PHF3Q92576 2039 aaKnown RBP23.04■■□□□ 1.28
VEGFA-232ENST00000640653 PRAMEF25A6NGN4 478 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 OR6C70A6NIJ9 312 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 MYO1GB0I1T2 1018 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 ICOSLGO75144 302 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 COQ9O75208 318 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 ERN1O75460 977 aaKnown RBP23.04■■□□□ 1.28
VEGFA-232ENST00000640653 REM1O75628 298 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 TOXO94900 526 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 SLITRK5O94991 958 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 NTSP30990 170 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 KRT20P35900 424 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 NCBP2P52298 156 aaKnown RBP eCLIP23.04■■□□□ 1.28
VEGFA-232ENST00000640653 DESI1Q6ICB0 168 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 IKBIPQ70UQ0 350 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 HOMEZQ8IX15 550 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 PM20D2Q8IYS1 436 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 ZNF295-AS1Q8N0V1 137 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 OR7G2Q8NG99 324 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.04■■□□□ 1.282e-10■■■■■ 37.7
VEGFA-232ENST00000640653 VSTM2LQ96N03 204 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 GATA5Q9BWX5 397 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-232ENST00000640653 FOLH1BQ9HBA9 442 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 TAS2R7Q9NYW3 318 aa23.04■■□□□ 1.28
VEGFA-232ENST00000640653 CACNA1CQ13936 2221 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 A0A0G2JNJ9 132 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 AHRRA9YTQ3 701 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 AZIN1O14977 448 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 SNPHO15079 494 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 RGS14O43566 566 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 SEC22BO75396 215 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 CHEK2O96017 543 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 CT45A8P0DMV1 189 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 CT45A9P0DMV2 189 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 PRPH2P23942 346 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 PTPN6P29350 595 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 TFF3Q07654 80 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 CRYZQ08257 329 aaKnown RBP23.03■■□□□ 1.28
VEGFA-232ENST00000640653 CT45A2Q5DJT8 189 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 RIPPLY2Q5TAB7 128 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 TRABD2AQ86V40 505 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 C14orf79Q96F83 325 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 SLC35A4Q96G79 324 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 TREX2Q9BQ50 279 aaPredicted RBP23.03■■□□□ 1.28
VEGFA-232ENST00000640653 GALNT9Q9HCQ5 603 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 Q9UFV3 132 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 NCKAP5O14513 1909 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 EXPH5Q8NEV8 1989 aa23.03■■□□□ 1.28
VEGFA-232ENST00000640653 NINQ8N4C6 2090 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 A0A087WV62 115 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 JUNP05412 331 aaKnown RBP23.02■■□□□ 1.28
VEGFA-232ENST00000640653 MSX1P28360 303 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 IL12BP29460 328 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 PTGDSP41222 190 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 CORO7P57737 925 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 EFR3AQ14156 821 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 SF3B4Q15427 424 aaKnown RBP eCLIP23.02■■□□□ 1.282e-10■■■□□ 18
VEGFA-232ENST00000640653 NHSL2Q5HYW2 709 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 EMBQ6PCB8 327 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 BANPQ8N9N5 519 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 TIMP4Q99727 224 aa23.02■■□□□ 1.28
VEGFA-232ENST00000640653 ROPN1BQ9BZX4 212 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms