RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PDGFRLQ15198 375 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 SDSLQ96GA7 329 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 RPS10-NUDT3A0A1W2PQS6 291 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 EEF1E1-BLOC1S5C9J1V9 151 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 ZNF207O43670 478 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 KIAA0513O60268 411 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 RPS10P46783 165 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 FAM214AQ32MH5 1076 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 ADGRF1Q5T601 910 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 SHFQ7M4L6 423 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 SPARTQ8N0X7 666 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 ZBTB45Q96K62 511 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 LIN7CQ9NUP9 197 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 FUOMA2VDF0 154 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 SLC31A1O15431 190 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 STAG3L2P0CL84 134 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 LFNGQ8NES3 379 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 SDCBP2Q9H190 292 aa18.5■□□□□ 0.55
CACNA1A-257ENST00000638009 SOX14O95416 240 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 RNH1P13489 461 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 RAB6AP20340 208 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CRYZQ08257 329 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 UEVLDQ8IX04 471 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 OR10T2Q8NGX3 314 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 TLCD1Q96CP7 247 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 PITHD1Q9GZP4 211 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 hCG_1809904A0A1W2PP81 198 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 A0A1W2PPE2 198 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 A0A1W2PR64 198 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 A0A1W2PRV1 198 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 SOX10P56693 466 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 RAP2BP61225 183 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 HIST2H3AQ71DI3 136 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 SERPINA12Q8IW75 414 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 FOXRED1Q96CU9 486 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 HMCESQ96FZ2 354 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 MKRN2Q9H000 416 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 NPFFR2Q9Y5X5 522 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 FAM155BO75949 473 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 NBPF12Q5TAG4 269 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 KBTBD6Q86V97 674 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 OR5D14Q8NGL3 314 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 TESQ9UGI8 421 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CT45A6P0DMU7 189 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CT45A5P0DMU8 189 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CT45A7P0DMV0 189 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CT45A8P0DMV1 189 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CT45A9P0DMV2 189 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 DDCP20711 480 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 GRIK5Q16478 980 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CT45A2Q5DJT8 189 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CT45A1Q5HYN5 189 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CT45A3Q8NHU0 189 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 SPOCK3Q9BQ16 436 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 HOXD1Q9GZZ0 328 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 CTPS2Q9NRF8 586 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 ECI1P42126 302 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 MTNR1AP48039 350 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 ELP4Q96EB1 424 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 SLC45A3Q96JT2 553 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 PRDM4Q9UKN5 801 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 YTHDF2Q9Y5A9 579 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 TMEM63AO94886 807 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 KCNK2O95069 426 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 FABP1P07148 127 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 GSK3BP49841 420 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 SF3A2Q15428 464 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 LIPJQ5W064 366 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 THOC6Q86W42 341 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 GPR137CQ8N3F9 429 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 OR51T1Q8NGJ9 327 aa18.49■□□□□ 0.55
CACNA1A-257ENST00000638009 GPR37L1O60883 481 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 TAS2R40P59535 323 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 CNKSR3Q6P9H4 555 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 CWH43Q9H720 699 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 KLHL42Q9P2K6 505 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 CPA4Q9UI42 421 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 EDDM13A0A1B0GTR0 161 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 DLX5P56178 289 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 KLF1Q13351 362 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 SGCAQ16586 387 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 LRFN4Q6PJG9 635 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 NUDT9Q9BW91 350 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 OR5M3Q8NGP4 307 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 PPP1R2P9O14990 202 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 FKTNO75072 461 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 DNAJB13P59910 316 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 PRSS48Q7RTY5 328 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 OR4N5Q8IXE1 308 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 SUMF1Q8NBK3 374 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 CUTCQ9NTM9 273 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 RFXAPO00287 272 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 KLF11O14901 512 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 TSPYL5Q86VY4 417 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 CERS5Q8N5B7 392 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 AMDHD1Q96NU7 426 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 SLC24A5Q71RS6 500 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 OTOP3Q7RTS5 596 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 NIPA2Q8N8Q9 360 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 B3GNT7Q8NFL0 401 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms