RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PCNX1Q96RV3 2341 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 TLDC2A0PJX2 215 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 HSPB2A8KAH6 182 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 UBFD1O14562 309 aaKnown RBP17.34■□□□□ 0.37
CLN6-221ENST00000637494 TO15178 435 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 COQ9O75208 318 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 ERN1O75460 977 aaKnown RBP17.34■□□□□ 0.37
CLN6-221ENST00000637494 RSL1D1O76021 490 aaKnown RBP17.34■□□□□ 0.37
CLN6-221ENST00000637494 TOXO94900 526 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 CAPN3P20807 821 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 MSX1P28360 303 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 IL12BP29460 328 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 NTSP30990 170 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 FOXA1P55317 472 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 MRPS22P82650 360 aaKnown RBP17.34■□□□□ 0.37
CLN6-221ENST00000637494 TLE4Q04727 773 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 EFR3AQ14156 821 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 HSPB2Q16082 182 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 SLC25A35Q3KQZ1 300 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 TIGD3Q6B0B8 471 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 RTL6Q6ICC9 239 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 SH2D5Q6ZV89 423 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 ZNF295-AS1Q8N0V1 137 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 PHF3Q92576 2039 aaKnown RBP17.34■□□□□ 0.37
CLN6-221ENST00000637494 HGDQ93099 445 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 COL21A1Q96P44 957 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 ZNF407Q9C0G0 2248 aa17.34■□□□□ 0.37
CLN6-221ENST00000637494 GPR55Q9Y2T6 319 aaPredicted RBP17.34■□□□□ 0.37
CLN6-221ENST00000637494 A0A0G2JNJ9 132 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 PRAMEF25A6NGN4 478 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 OR6C70A6NIJ9 312 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 RGS14O43566 566 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 ICOSLGO75144 302 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 SEC22BO75396 215 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 SLITRK5O94991 958 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 CHEK2O96017 543 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 NCBP2P52298 156 aaKnown RBP eCLIP17.33■□□□□ 0.36
CLN6-221ENST00000637494 IFFO1Q0D2I5 559 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 TRIM46Q7Z4K8 759 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 C4orf33Q8N1A6 199 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 RIBC1Q8N443 379 aaPredicted RBP17.33■□□□□ 0.36
CLN6-221ENST00000637494 SIMC1Q8NDZ2 872 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 TMBIM1Q969X1 311 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 C11orf24Q96F05 449 aaPredicted RBP17.33■□□□□ 0.36
CLN6-221ENST00000637494 METTL2AQ96IZ6 378 aaKnown RBP17.33■□□□□ 0.36
CLN6-221ENST00000637494 BTBD9Q96Q07 612 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 NODALQ96S42 347 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 UBQLN3Q9H347 655 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 MYNNQ9NPC7 610 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 Q9UFV3 132 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 CAMK2AQ9UQM7 478 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 OR10H1Q9Y4A9 318 aa17.33■□□□□ 0.36
CLN6-221ENST00000637494 POLR3HQ9Y535 204 aaPredicted RBP17.33■□□□□ 0.36
CLN6-221ENST00000637494 SLC28A1O00337 649 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 SNPHO15079 494 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 PLOD3O60568 738 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 UGT2B11O75310 529 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 CBR3O75828 277 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 IL2RAP01589 272 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 PTPN6P29350 595 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 CRYZQ08257 329 aaKnown RBP17.32■□□□□ 0.36
CLN6-221ENST00000637494 CEBPEQ15744 281 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 IKBIPQ70UQ0 350 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 WDR53Q7Z5U6 358 aaPredicted RBP17.32■□□□□ 0.36
CLN6-221ENST00000637494 LACC1Q8IV20 430 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 ACBD4Q8NC06 268 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 ABTB1Q969K4 478 aaPredicted RBP17.32■□□□□ 0.36
CLN6-221ENST00000637494 TIMP4Q99727 224 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 TREX2Q9BQ50 279 aaPredicted RBP17.32■□□□□ 0.36
CLN6-221ENST00000637494 TRMOQ9BU70 441 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 FOLH1BQ9HBA9 442 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 MCCC2Q9HCC0 563 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 MAPRE3Q9UPY8 281 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 SLC6A5Q9Y345 797 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 CACNA1CQ13936 2221 aa17.32■□□□□ 0.36
CLN6-221ENST00000637494 DNAJC13O75165 2243 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 MYO1GB0I1T2 1018 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 DVL2O14641 736 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 EPPINO95925 133 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 ACTL6AO96019 429 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 JUNP05412 331 aaKnown RBP17.31■□□□□ 0.36
CLN6-221ENST00000637494 SOX18P35713 384 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 SLC18A2Q05940 514 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 TFF3Q07654 80 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 ZNF155Q12901 538 aaPredicted RBP17.31■□□□□ 0.36
CLN6-221ENST00000637494 RCAN2Q14206 197 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 ZNHIT3Q15649 155 aaPredicted RBP17.31■□□□□ 0.36
CLN6-221ENST00000637494 NHSL2Q5HYW2 709 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 WIPI1Q5MNZ9 446 aaPredicted RBP17.31■□□□□ 0.36
CLN6-221ENST00000637494 FNDC7Q5VTL7 733 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 CES4AQ5XG92 561 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 VASNQ6EMK4 673 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 NOXRED1Q6NXP6 359 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 LARP4Q71RC2 724 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLN6-221ENST00000637494 SLC44A2Q8IWA5 706 aaPredicted RBP17.31■□□□□ 0.36
CLN6-221ENST00000637494 FAM83FQ8NEG4 500 aaPredicted RBP17.31■□□□□ 0.36
CLN6-221ENST00000637494 OR14L1PQ8NHC6 308 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 SLC35A4Q96G79 324 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 ADOQ96SZ5 270 aa17.31■□□□□ 0.36
CLN6-221ENST00000637494 ZNF559Q9BR84 538 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms