RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SLC35D1Q9NTN3 355 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 VPS29Q9UBQ0 182 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MED13LQ71F56 2210 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SPATA31A6Q5VVP1 1343 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MEGF11A6BM72 1044 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 NKX6-3A6NJ46 265 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CEBPZOSA8MTT3 80 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LYZL6O75951 148 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 RGS11O94810 467 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 C8BP07358 591 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MMP2P08253 660 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TPT1P13693 172 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 DNASE1P24855 282 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SIM2Q14190 667 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CEACAM20Q6UY09 585 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SLC24A5Q71RS6 500 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 KBTBD6Q86V97 674 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ANKRD46Q86W74 232 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 KCNC2Q96PR1 638 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ACBD6Q9BR61 282 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ENKD1Q9H0I2 346 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM184BQ9Y519 407 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LOC102724200A0A096LPH7 203 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 OR5K3A6NET4 321 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SLC15A5A6NIM6 579 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 F8W036 122 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TOX4O94842 621 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 C2P06681 752 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 GSTP1P09211 210 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ADORA3P0DMS8 318 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 UGT1A6P19224 532 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CRHR1P34998 444 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 NDST2P52849 883 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CES4AQ5XG92 561 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SFXN5Q8TD22 340 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 HPSE2Q8WWQ2 592 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 IRGQQ8WZA9 623 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CNTNAP3BQ96NU0 1288 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 OR4K3Q96R72 315 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TAAR1Q96RJ0 339 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CNN2Q99439 309 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 BARX1Q9HBU1 254 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SLAMF7Q9NQ25 335 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LHX6Q9UPM6 363 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CNOT1A5YKK6 2376 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 A0A0A6YYJ9 748 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 A0A1W2PRB8 838 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 A8MUA0 341 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PLSCR1O15162 318 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 DCNP07585 359 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 UBCP0CG48 685 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ENPP1P22413 925 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 NFYBP25208 207 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 DIO3P55073 304 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SRPXP78539 464 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MPP1Q00013 466 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 GBE1Q04446 702 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 AKR1C1Q04828 323 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF630Q2M218 657 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ARHGAP11BQ3KRB8 267 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 GPR153Q6NV75 609 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CELF5Q8N6W0 485 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SAMD12Q8N8I0 201 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 FNDC9Q8TBE3 224 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 GPRC5CQ9NQ84 441 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 JCADQ9P266 1359 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 CLTCQ00610 1675 aaKnown RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 PMS2P1A4D2B8 440 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 H3BSH0 61 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 GPR39O43194 453 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 TXNL1O43396 289 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 PRKYO43930 277 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 NIPSNAP2O75323 286 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 RFPL1O75677 317 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 OAS1P00973 400 aaKnown RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 MT-ND4P03905 459 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 TP53P04637 393 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 SMIM10L2AP0DMW4 78 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 SMIM10L2BP0DMW5 78 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 SELPP16109 830 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 GPM6BQ13491 265 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 C2orf27AQ580R0 203 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 OR6Q1Q8NGQ2 317 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 PGM2Q96G03 612 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 BEX2Q9BXY8 128 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 DPH3P1Q9H4G8 78 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 EPHX3Q9H6B9 360 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 ZBTB20Q9HC78 741 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 SLC27A5Q9Y2P5 690 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 hCG_2039718K7EN88 272 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF8P17098 575 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 DAP3P51398 398 aaKnown RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 MRPS5P82675 430 aaKnown RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 NRG1Q02297 640 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 FAM182AQ5T1J6 154 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 HIST2H3PS2Q5TEC6 136 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 LIPKQ5VXJ0 399 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 TRIM74Q86UV6 250 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 TRIM73Q86UV7 250 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms