RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 EGLN3Q9H6Z9 239 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 GORASP2Q9H8Y8 452 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 C3orf14Q9HBI5 128 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 S100A14Q9HCY8 104 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 ZNF334Q9HCZ1 680 aaPredicted RBP2.81□□□□□ -1.96
VPS8-228ENST00000628962 ZFP57Q9NU63 452 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 NMRK1Q9NWW6 199 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 SMPD3Q9NY59 655 aaPredicted RBP2.81□□□□□ -1.96
VPS8-228ENST00000628962 FLRT3Q9NZU0 649 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 POMT2Q9UKY4 750 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 GRID1Q9ULK0 1009 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 ZNF490Q9ULM2 529 aaPredicted RBP2.81□□□□□ -1.96
VPS8-228ENST00000628962 DIMT1Q9UNQ2 313 aaKnown RBP2.81□□□□□ -1.96
VPS8-228ENST00000628962 ATG4BQ9Y4P1 393 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 ASB3Q9Y575 518 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 PAPPA2Q9BXP8 1791 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 CCDC88AQ3V6T2 1871 aa2.81□□□□□ -1.96
VPS8-228ENST00000628962 NPC1L1Q9UHC9 1359 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 UMODL1Q5DID0 1318 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 TTC21BQ7Z4L5 1316 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 USP42Q9H9J4 1324 aaKnown RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 C15orf38-AP3S2A0A0A6YYH1 394 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 A0A1W2PNU3 283 aaPredicted RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 A0A1W2PS18 150 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 YJEFN3A6XGL0 299 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 K7EQM0 130 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 CXCL11O14625 94 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 XPO1O14980 1071 aaKnown RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 ARPC1BO15143 372 aaKnown RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 NUDT21O43809 227 aaKnown RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 FGF17O60258 216 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 TBX19O60806 448 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 KRT33AO76009 404 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 ADCY5O95622 1261 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 CAVIN2O95810 425 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 EML2O95834 649 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 TXNDC12O95881 172 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 CALCAP01258 141 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 UGT2B4P06133 528 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 LYNP07948 512 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 CCDC159P0C7I6 412 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 IGHV4-38-2P0DP08 117 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 CLUP10909 449 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 LIFP15018 202 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 DRD5P21918 477 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 GPX3P22352 226 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 IL4RP24394 825 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 GDI1P31150 447 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 FCGR2BP31994 310 aaPredicted RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 OTX2P32243 289 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 DLSTP36957 453 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 DHPSP49366 369 aaPredicted RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 CCR4P51679 360 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 LIMK2P53671 638 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 NAPAP54920 295 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 BEX3Q00994 111 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 CDR2Q01850 454 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 FUT7Q11130 342 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 COX10Q12887 443 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 MEF2DQ14814 521 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 OR1C1Q15619 314 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 EXT1Q16394 746 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 PDK4Q16654 411 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 TMEM30BQ3MIR4 351 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 CCDC152Q4G0S7 254 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 NCR3LG1Q68D85 454 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 ARHGAP17Q68EM7 881 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 PMF1Q6P1K2 205 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 LRRC8BQ6P9F7 803 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 TMEM207Q6UWW9 146 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 RUFY3Q7L099 469 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 SLC22A16Q86VW1 577 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 KIRREL3Q8IZU9 778 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 GCNT2Q8N0V5 402 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 PARP8Q8N3A8 854 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 KBTBD3Q8NAB2 608 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 MLKLQ8NB16 471 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 SMPDL3AQ92484 453 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 ZNF501Q96CX3 271 aaPredicted RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 ST6GAL2Q96JF0 529 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 DEFB118Q96PH6 123 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 VPS35Q96QK1 796 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 ZNF607Q96SK3 696 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 KRT12Q99456 494 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 ZSCAN5AQ9BUG6 496 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 WRAP53Q9BUR4 548 aaKnown RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 LRRC40Q9H9A6 602 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 COG4Q9H9E3 785 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 UBE2TQ9NPD8 197 aaPredicted RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 SLC52A3Q9NQ40 469 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 RDH8Q9NYR8 311 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 RAI14Q9P0K7 980 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 PTBP2Q9UKA9 531 aaKnown RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 PRDM4Q9UKN5 801 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 ELF5Q9UKW6 265 aaPredicted RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 FOXJ3Q9UPW0 622 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 CAB39Q9Y376 341 aaPredicted RBP2.8□□□□□ -1.96
VPS8-228ENST00000628962 TMED5Q9Y3A6 229 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 SELENOKQ9Y6D0 94 aa2.8□□□□□ -1.96
VPS8-228ENST00000628962 ZFHX4Q86UP3 3567 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms