RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 OR8D4Q8NGM9 314 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 OR2A1Q8NGT9 310 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 TEX47Q8TBZ9 253 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 SPPL3Q8TCT6 385 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 SUSD6Q92537 303 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 KLK6Q92876 244 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 ZG16BQ96DA0 208 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 CNRIP1Q96F85 164 aaPredicted RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 MSLNLQ96KJ4 702 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 DMRTB1Q96MA1 342 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 KCTD7Q96MP8 289 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 TRMT61BQ9BVS5 477 aaKnown RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 PITHD1Q9GZP4 211 aaPredicted RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 MBNL1Q9NR56 388 aaKnown RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 IMP3Q9NV31 184 aaKnown RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 ATG4BQ9Y4P1 393 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 A0A1W2PR48 441 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 MEIOCA2RUB1 952 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 PRODHO43272 600 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 ERI3O43414 337 aaKnown RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 TMCC2O75069 709 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 PCDH8O95206 1070 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 CSF3P09919 207 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 SSTR4P31391 388 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 CD79BP40259 229 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 CAV3P56539 151 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 SLC27A4Q6P1M0 643 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 SLC36A4Q6YBV0 504 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 GALNT6Q8NCL4 622 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 ZNF707Q96C28 371 aaPredicted RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 ST6GAL2Q96JF0 529 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 PHOX2BQ99453 314 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 EQTNQ9NQ60 294 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 WBP1LQ9NX94 342 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 GPR55Q9Y2T6 319 aaPredicted RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 SF3B6Q9Y3B4 125 aaKnown RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 NUP210Q8TEM1 1887 aaPredicted RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 A6NL46 340 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 CPSF4LA6NMK7 179 aaKnown RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 FAM170BA6NMN3 283 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 C1QTNF3-AMACRE9PGA6 284 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 HNRNPA1P09651 372 aaKnown RBP eCLIP10.59□□□□□ -0.71
VARS2-213ENST00000625423 GSTM3P21266 225 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 MTNR1AP48039 350 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 SLC9A3P48764 834 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 RAB40BQ12829 278 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 HYAL2Q12891 473 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 PDZK1Q5T2W1 519 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 PIP5KL1Q5T9C9 394 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 TYW3Q6IPR3 259 aaKnown RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 KIAA1161Q6NSJ0 714 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 XKRXQ6PP77 449 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 UBE2J2Q8N2K1 259 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 FAM181AQ8N9Y4 354 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 TP53INP1Q96A56 240 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 KATNB1Q9BVA0 655 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 PINK1Q9BXM7 581 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
VARS2-213ENST00000625423 CXXC1Q9P0U4 656 aaPredicted RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.59□□□□□ -0.71
VARS2-213ENST00000625423 RANBP2P49792 3224 aaKnown RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 PTPRSQ13332 1948 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 A0A0G2JPF8 293 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 TBC1D3BA6NDS4 549 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 HNRNPCL2B2RXH8 293 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 HNRNPCL3B7ZW38 293 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 FAM47E-STBD1D6RA91 191 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 STK25O00506 426 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 HNRNPCL4P0DMR1 293 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 HOXC5Q00444 222 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 ZNF311Q5JNZ3 666 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 DDI2Q5TDH0 399 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 C18orf63Q68DL7 685 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 LSRQ86X29 649 aaPredicted RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 VRK2Q86Y07 508 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 OR52P1PQ8NH57 321 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 FAM46AQ96IP4 442 aaKnown RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 CAMK1GQ96NX5 476 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 HDAC8Q9BY41 377 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 OR2B2Q9GZK3 357 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 C11orf54Q9H0W9 315 aaPredicted RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 CERS4Q9HA82 394 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 FGF20Q9NP95 211 aaPredicted RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 PRSS16Q9NQE7 514 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 KCNK6Q9Y257 313 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 XIRP2A4UGR9 3374 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 TMEM129A0AVI4 362 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 SLC30A4O14863 429 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 CH25HO95992 272 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 FABP5Q01469 135 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 CHRNEQ04844 493 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 UBE3AQ05086 875 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 TBRG1Q3YBR2 411 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 ZFP69Q49AA0 526 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 PYDC2Q56P42 97 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 C6orf183Q5T699 404 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 FBXO46Q6PJ61 603 aaPredicted RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 RTL10Q7L3V2 364 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 LHFPL3Q86UP9 236 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms