RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 GPR83Q9NYM4 423 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 MRPS2Q9Y399 296 aaKnown RBP18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC22A1O15245 554 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 ALPPP05187 535 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 EIF2S1P05198 315 aaKnown RBP18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 INHBBP09529 407 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 MLLT1Q03111 559 aaPredicted RBP18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 TARDBPQ13148 414 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 TDGQ13569 410 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 ZNF311Q5JNZ3 666 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 CDC73Q6P1J9 531 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 PTCHD4Q6ZW05 846 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 ADAMTS15Q8TE58 950 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC35A4Q96G79 324 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 POLR2J3Q9H1A7 115 aaKnown RBP18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 TMEM74BQ9NUR3 256 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 SELENONQ9NZV5 590 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 NME6O75414 186 aaPredicted RBP18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 CLPXO76031 633 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 AGR2O95994 175 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 OLR1P78380 273 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 MOGQ16653 247 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 FAM214AQ32MH5 1076 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 SLX4IPQ5VYV7 408 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 CD300LDQ6UXZ3 194 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 CROCCP3Q8IVE0 287 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 OR4N5Q8IXE1 308 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 ZG16BQ96DA0 208 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 ARHGDIGQ99819 225 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 ORAI3Q9BRQ5 295 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 ITPAQ9BY32 194 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 PTGFRNQ9P2B2 879 aa18.48■□□□□ 0.55
PCDHB11-202ENST00000624887 DNAH14Q0VDD8 3507 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 OR5K3A6NET4 321 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 CHURC1-FNTBB4DL54 471 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 CPMP14384 443 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 PORP16435 677 aaPredicted RBP18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 BLKP51451 505 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 HHEXQ03014 270 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 COX10Q12887 443 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 Q7L0L9 218 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 PRSS41Q7RTY9 318 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 OOSP2Q86WS3 158 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 STX19Q8N4C7 294 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC16A11Q8NCK7 471 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 KLHDC7BQ96G42 594 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 CLN6Q9NWW5 311 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 C2orf42Q9NWW7 574 aa18.47■□□□□ 0.55
PCDHB11-202ENST00000624887 ZNF860A6NHJ4 632 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 TLR4O00206 839 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 ZIC2O95409 532 aaPredicted RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 SOX14O95416 240 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 STSP08842 583 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 TGFBR2P37173 567 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 SNRPGP62308 76 aaKnown RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 ALDH6A1Q02252 535 aaKnown RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 ST3GAL4Q11206 333 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 C1orf61Q13536 156 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 C12orf73Q69YU5 71 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 PTCRAQ6ISU1 281 aaPredicted RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 WDR53Q7Z5U6 358 aaPredicted RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 PARGQ86W56 976 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 VRK2Q86Y07 508 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 MORN4Q8NDC4 146 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 B3GNT7Q8NFL0 401 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 OR4K5Q8NGD3 323 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 NR4A3Q92570 626 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 C11orf16Q9NQ32 467 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 CNOT2Q9NZN8 540 aaKnown RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC13A4Q9UKG4 626 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 SLCO1B1Q9Y6L6 691 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 SPACA6W5XKT8 324 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 EFCAB10A6NFE3 127 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 CLDN24A6NM45 220 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 H3BN98 237 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 TPST2O60704 377 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 IGFBP1P08833 259 aaPredicted RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 FOSL2P15408 326 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 PRKAR1BP31321 381 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 SOX18P35713 384 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 PDX1P52945 283 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 PPP1CAP62136 330 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 NDUFA9Q16795 377 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 ZNF829Q3KNS6 432 aaPredicted RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 ZNF628Q5EBL2 1059 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 ZER1Q7Z7L7 766 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 ZNF761Q86XN6 746 aaPredicted RBP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 CSNK1A1LQ8N752 337 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 FAM174AQ8TBP5 190 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 ZDHHC1Q8WTX9 485 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC38A4Q969I6 547 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 IL21RQ9HBE5 538 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 CHST2Q9Y4C5 530 aa18.46■□□□□ 0.55
PCDHB11-202ENST00000624887 FCMRO60667 390 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 TP53P04637 393 aaPredicted RBP18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 CD36P16671 472 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 MMP11P24347 488 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 MLLT10P55197 1068 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 IRF3Q14653 427 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms