RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ARHGAP42A6NI28 874 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SLC15A5A6NIM6 579 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF716A6NP11 495 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 TMCO5BA8MYB1 307 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF879B4DU55 563 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 HSBP1L1C9JCN9 74 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 E9PAM4 449 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SURF6O75683 361 aaKnown RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 FLOT1O75955 427 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SLC16A8O95907 504 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 OTCP00480 354 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 C9P02748 559 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 MT-ND1P03886 318 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF735P0CB33 412 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF853P0CG23 659 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SPP1P10451 314 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 PTBP1P26599 531 aaKnown RBP eCLIP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 FCGR2BP31994 310 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 FCGR2CP31995 323 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 S100A5P33763 92 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 FRKP42685 505 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 EIF3EP60228 445 aaKnown RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 NDPQ00604 133 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 TNFRSF17Q02223 184 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 TNK1Q13470 666 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 NADK2Q4G0N4 442 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 PRR30Q53SZ7 412 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 PRAMEF20Q5VT98 475 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 EMBQ6PCB8 327 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 ARSKQ6UWY0 536 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 C11orf57Q6ZUT1 292 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 LRRC70Q7Z2Q7 622 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 GPR141Q7Z602 305 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 TMCO2Q7Z6W1 182 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF573Q86YE8 665 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SLC22A9Q8IVM8 553 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SIAH3Q8IW03 269 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SLC34A3Q8N130 599 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 C11orf42Q8N5U0 333 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 ARFGAP2Q8N6H7 521 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 CCNYQ8ND76 341 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 BHLHE23Q8NDY6 225 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 OCC1Q8TAD7 63 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 CD99L2Q8TCZ2 262 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 ACMSDQ8TDX5 336 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 RAD54LQ92698 747 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 FBXO32Q969P5 355 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 NCLNQ969V3 563 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 LRRC45Q96CN5 670 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SNRNP40Q96DI7 357 aaKnown RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SPATA13Q96N96 652 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SECISBP2Q96T21 854 aaKnown RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 PCDHB18PQ96TA0 734 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 SH3GL1Q99961 368 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 RBM24Q9BX46 236 aaKnown RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 TMEM117Q9H0C3 514 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 RAB17Q9H0T7 212 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 PNNQ9H307 717 aaKnown RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 EXO5Q9H790 373 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 AGPAT5Q9NUQ2 364 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 RUVBL2Q9Y230 463 aaKnown RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 EXOC6BQ9Y2D4 811 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 STK38LQ9Y2H1 464 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 KIF25-AS1Q9Y6Z4 181 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 NCAPD2Q15021 1401 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 CFAP65Q6ZU64 1925 aaKnown RBP3.25□□□□□ -1.89
BRCA1-229ENST00000621897 NPC1L1Q9UHC9 1359 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 OR6C74A6NCV1 312 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 C5orf51A6NDU8 294 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 YDJCA8MPS7 323 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 ANHXE9PGG2 379 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 NVLO15381 856 aaKnown RBP3.24□□□□□ -1.89
BRCA1-229ENST00000621897 YKT6O15498 198 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 MED7O43513 233 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 ECI2O75521 394 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 SCGB2A1O75556 95 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 CIB2O75838 187 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 SMC2O95347 1197 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 GH1P01241 217 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 CHRNA1P02708 482 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 HPGDP15428 266 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 LBPP18428 481 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 CALB2P22676 271 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 CTNNA2P26232 953 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 PSMB4P28070 264 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 PTPN6P29350 595 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 ELK3P41970 407 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 KCNJ1P48048 391 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 CRYBA2P53672 197 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 ACTR3P61158 418 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 RPS8P62241 208 aaKnown RBP3.24□□□□□ -1.89
BRCA1-229ENST00000621897 HSPA14Q0VDF9 509 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 LCP2Q13094 533 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 SPP2Q13103 211 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 CYLC2Q14093 348 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-229ENST00000621897 CDO1Q16878 200 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 Q1RN00 199 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 TMEM44Q2T9K0 475 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 POM121L1PQ3SYA9 428 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 EPC2Q52LR7 807 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms