RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 IKBIPQ70UQ0 350 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 GDF7Q7Z4P5 450 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 LILRB4Q8NHJ6 448 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 KAT2AQ92830 837 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 BBS4Q96RK4 519 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 TTYH2Q9BSA4 534 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 GATA5Q9BWX5 397 aaPredicted RBP18.02■□□□□ 0.48
PTBP1-219ENST00000621737 ANKRA2Q9H9E1 313 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 CCL27Q9Y4X3 112 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 PCDHGB3Q9Y5G1 929 aa18.02■□□□□ 0.48
PTBP1-219ENST00000621737 MYO1GB0I1T2 1018 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 NPIPB8E9PQR5 432 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 AZIN1O14977 448 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 PLOD3O60568 738 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 TRIM13O60858 407 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 SLITRK5O94991 958 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 HPNP05981 417 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 SNRPB2P08579 225 aaKnown RBP18.01■□□□□ 0.47
PTBP1-219ENST00000621737 HOXD4P09016 255 aaPredicted RBP18.01■□□□□ 0.47
PTBP1-219ENST00000621737 GABRA1P14867 456 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 ELAVL4P26378 380 aaKnown RBP18.01■□□□□ 0.47
PTBP1-219ENST00000621737 KIR3DL1P43629 444 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 TRPC1P48995 793 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 CDK9P50750 372 aaKnown RBP18.01■□□□□ 0.47
PTBP1-219ENST00000621737 SNTA1Q13424 505 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 C1orf185Q5T7R7 199 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 RTL6Q6ICC9 239 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 RNF165Q6ZSG1 346 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 SRRM1Q8IYB3 904 aaKnown RBP18.01■□□□□ 0.47
PTBP1-219ENST00000621737 CAVIN3Q969G5 261 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 VSTM2LQ96N03 204 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 SPOCK3Q9BQ16 436 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 OSBPL11Q9BXB4 747 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 TRIM8Q9BZR9 551 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 STMN4Q9H169 189 aaPredicted RBP18.01■□□□□ 0.47
PTBP1-219ENST00000621737 TAS2R7Q9NYW3 318 aa18.01■□□□□ 0.47
PTBP1-219ENST00000621737 CREBBPQ92793 2442 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 OR6C70A6NIJ9 312 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 SLC28A1O00337 649 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 RGS14O43566 566 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 UGT2B11O75310 529 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 ERN1O75460 977 aaKnown RBP18■□□□□ 0.47
PTBP1-219ENST00000621737 GLI4P10075 376 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 NEFHP12036 1026 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 TIGD3Q6B0B8 471 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 SLC30A6Q6NXT4 461 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 CCDC71Q8IV32 467 aaPredicted RBP18■□□□□ 0.47
PTBP1-219ENST00000621737 ACBD4Q8NC06 268 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 OR7G2Q8NG99 324 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 TMBIM1Q969X1 311 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 GNRHR2Q96P88 292 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 FAM111AQ96PZ2 611 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 NODALQ96S42 347 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 ROPN1BQ9BZX4 212 aaPredicted RBP18■□□□□ 0.47
PTBP1-219ENST00000621737 ENKD1Q9H0I2 346 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 ROPN1Q9HAT0 212 aaPredicted RBP18■□□□□ 0.47
PTBP1-219ENST00000621737 FOLH1BQ9HBA9 442 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 TAS2R9Q9NYW1 312 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 PTGDR2Q9Y5Y4 395 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 CSMD1Q96PZ7 3565 aa18■□□□□ 0.47
PTBP1-219ENST00000621737 C15orf38-AP3S2A0A0A6YYH1 394 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 PRAMEF25A6NGN4 478 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 FAM90A27PA6NNH2 459 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 ABCB7O75027 752 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 COQ9O75208 318 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 SEC22BO75396 215 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 TRAPPC6AO75865 159 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 SLU7O95391 586 aaKnown RBP17.99■□□□□ 0.47
PTBP1-219ENST00000621737 CT45A8P0DMV1 189 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 CT45A9P0DMV2 189 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 PTPN6P29350 595 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 NTSP30990 170 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 NCBP2P52298 156 aaKnown RBP eCLIP17.99■□□□□ 0.476e-6■■■■■ 27.5
PTBP1-219ENST00000621737 CORO7P57737 925 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 KIAA0040Q15053 153 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 PRSS53Q2L4Q9 553 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 CT45A2Q5DJT8 189 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 KANK2Q63ZY3 851 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 DESI1Q6ICB0 168 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 ANGPTL8Q6UXH0 198 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 HOMEZQ8IX15 550 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 OR1J4Q8NGS1 313 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 SLC35A4Q96G79 324 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 COL21A1Q96P44 957 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 TREX2Q9BQ50 279 aaPredicted RBP17.99■□□□□ 0.47
PTBP1-219ENST00000621737 LRTM1Q9HBL6 345 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 C1orf109Q9NX04 203 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 KLRF1Q9NZS2 232 aa17.99■□□□□ 0.47
PTBP1-219ENST00000621737 EXO1Q9UQ84 846 aaKnown RBP17.99■□□□□ 0.47
PTBP1-219ENST00000621737 TACC2O95359 2948 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 A0A087WV62 115 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 FAM47E-STBD1D6RA91 191 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 GNB5O14775 395 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 SNPHO15079 494 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 NPHS1O60500 1241 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 ICOSLGO75144 302 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 CHEK2O96017 543 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 JUNP05412 331 aaKnown RBP17.98■□□□□ 0.47
PTBP1-219ENST00000621737 ALDH3A1P30838 453 aa17.98■□□□□ 0.47
PTBP1-219ENST00000621737 PTGDSP41222 190 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms