RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PGAM2P15259 253 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF763Q0D2J5 394 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 ARFRP1Q13795 201 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 COLEC12Q5KU26 742 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 VRK3Q8IV63 474 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 FOXRED2Q8IWF2 684 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF101Q8IZC7 436 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 S100ZQ8WXG8 99 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 ALPK1Q96QP1 1244 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 MCCC1Q96RQ3 725 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 NEURL2Q9BR09 285 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 TM9SF3Q9HD45 589 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SACM1LQ9NTJ5 587 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 PHF11Q9UIL8 331 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CLEC4EQ9ULY5 219 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 RBMX2Q9Y388 322 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 ACACBO00763 2458 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ESPL1Q14674 2120 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 EFCAB9A8MZ26 197 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC16A6O15403 523 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 CAPN5O15484 640 aaPredicted RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ADAM23O75077 832 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 H1F0P07305 194 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 NUDT7P0C024 238 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 FPR1P21462 350 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 PCMT1P22061 227 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ACVR2AP27037 513 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ACSL1P33121 698 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 NAA10P41227 235 aaPredicted RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 CEBPGP53567 150 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 RPP38P78345 283 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 GSTM4Q03013 218 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 DUOXA1Q1HG43 343 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 SPIN4Q56A73 249 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 NEK5Q6P3R8 708 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 TMEM64Q6YI46 380 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 LRRC70Q7Z2Q7 622 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ZSWIM9Q86XI8 627 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 TCEANCQ8N8B7 351 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 AQP11Q8NBQ7 271 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 CRB3Q9BUF7 120 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 CLEC4MQ9H2X3 399 aaPredicted RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 IL1RAPQ9NPH3 570 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 SUSD2Q9UGT4 822 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 DKKL1Q9UK85 242 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 CHD5Q8TDI0 1954 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 WNK1Q9H4A3 2382 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 H0Y8X5 98 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 RNF13O43567 381 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 RDH16O75452 317 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ADORA3P0DMS8 318 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ETFAP13804 333 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 MAZP56270 477 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 KIAA1614Q5VZ46 1190 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 LILRA3Q8N6C8 439 aaPredicted RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 LGALS12Q96DT0 336 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ADAD1Q96M93 576 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 CTRCQ99895 268 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 BEX2Q9BXY8 128 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 TMEM168Q9H0V1 697 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 BEX1Q9HBH7 125 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 GBF1Q92538 1859 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ANXA2P2A6NMY6 339 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 GABARAPO95166 117 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ANXA2P07355 339 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 LAMP1P11279 417 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 BMP4P12644 408 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 GP1BBP13224 206 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 CAPZA1P52907 286 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 PPP3R1P63098 170 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 PLCXD2Q0VAA5 305 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 HYAL4Q2M3T9 481 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 CALHM3Q86XJ0 350 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 ZZZ3Q8IYH5 903 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 DNAJB8Q8NHS0 232 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 PARPBPQ9NWS1 579 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 TAS2R9Q9NYW1 312 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 MBD1Q9UIS9 605 aaPredicted RBP7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 NUP50Q9UKX7 468 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 SIT1Q9Y3P8 196 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 WNK2Q9Y3S1 2297 aa7.84□□□□□ -1.15
PTPDC1-204ENST00000620992 PLXNA3P51805 1871 aa7.84□□□□□ -1.16
PTPDC1-204ENST00000620992 TRBV5-3A0A0A0MS03 114 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 TRIM64BA6NI03 449 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 SGK494L7N484 410 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 IGHA2P01877 340 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 CD2P06729 351 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 HSD17B2P37059 387 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 SLC35A2P78381 396 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 LRIF1Q5T3J3 769 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 IDNKQ5T6J7 187 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 LAIR1Q6GTX8 287 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 LIN54Q6MZP7 749 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF765Q7L2R6 523 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 SLC22A16Q86VW1 577 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 TRAM1L1Q8N609 369 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 LPAR4Q99677 370 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 SPATA9Q9BWV2 254 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 ALOXE3Q9BYJ1 711 aa7.83□□□□□ -1.16
PTPDC1-204ENST00000620992 PTGES2Q9H7Z7 377 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms