RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TCRBV16S1A1N1A0A5B0 115 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ARGFXA6NJG6 315 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GLOD5A6NK44 160 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 A8MUA0 341 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 H3BNH8 94 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 HRKO00198 91 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 LSM1O15116 133 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 FGF17O60258 216 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MRPS14O60783 128 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 LDB3O75112 727 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GUCY1B2O75343 617 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 TRMUO75648 421 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ATP6AP2O75787 350 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 SEC24DO94855 1032 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 SORBS2O94875 1100 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 DDAH2O95865 285 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PDGFAP04085 211 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 IL3P08700 152 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PRR35P0CG20 571 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GPX3P22352 226 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MYF6P23409 242 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PRPH2P23942 346 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 HTR1EP28566 365 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 TLX1P31314 330 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 TIA1P31483 386 aaKnown RBP eCLIP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GALNSP34059 522 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PTGER1P34995 402 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GSTM5P46439 218 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ALDH3B2P48448 385 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 CCL11P51671 97 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GPR143P51810 404 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 KCNK10P57789 538 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 TAS2R50P59544 299 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 IGLV3-21P80748 117 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MRPS22P82650 360 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 TNFRSF17Q02223 184 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MFAP5Q13361 173 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 TOP3AQ13472 1001 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 DCTN2Q13561 401 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 APOFQ13790 326 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 SERTAD2Q14140 314 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 FXNQ16595 210 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 LRRC36Q1X8D7 754 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 RFX4Q33E94 735 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ZBED5Q49AG3 693 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MINDY4Q4G0A6 757 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 RFTN2Q52LD8 501 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PDCD4Q53EL6 469 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 NHSL2Q5HYW2 709 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 REP15Q6BDI9 236 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 FAM71E1Q6IPT2 247 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 FAM180BQ6P0A1 224 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MTFR2Q6P444 385 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GALNT18Q6P9A2 607 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 DHRS4L2Q6PKH6 230 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 BLOC1S3Q6QNY0 202 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PRICKLE2Q7Z3G6 844 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 CPEB2Q7Z5Q1 589 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PATL1Q86TB9 770 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GPR180Q86V85 440 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 CARM1Q86X55 608 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 NUDT13Q86X67 352 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 GPALPP1Q8IXQ4 340 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 DPP10Q8N608 796 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 SLC5A8Q8N695 610 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF321PQ8N8H1 164 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 DRAXINQ8NBI3 349 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 NFAM1Q8NET5 270 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 FDCSPQ8NFU4 85 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 OR8K3Q8NH51 312 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 FAM81AQ8TBF8 368 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 C16orf78Q8WTQ4 265 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PSMF1Q92530 271 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 DAZLQ92904 295 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PPWD1Q96BP3 646 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 C19orf60Q96EN9 201 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 RMND5BQ96G75 393 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 AURKBQ96GD4 344 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MAGED4Q96JG8 741 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 EGLN2Q96KS0 407 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PPP1R36Q96LQ0 422 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 IMMP1LQ96LU5 166 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PTCHD1Q96NR3 888 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 LPAR4Q99677 370 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 NPAS2Q99743 824 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PKP2Q99959 881 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 PELOQ9BRX2 385 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 EBPLQ9BY08 206 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 UGT2B28Q9BY64 529 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 BRINP2Q9C0B6 783 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 SEMA4CQ9C0C4 833 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF552Q9H707 407 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 COPS7BQ9H9Q2 264 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MMP25Q9NPA2 562 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 SLAMF7Q9NQ25 335 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 TBCCD1Q9NVR7 557 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 SIRT5Q9NXA8 310 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 AHSPQ9NZD4 102 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 LEF1Q9UJU2 399 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF223Q9UK11 482 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms