RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 JUNBP17275 347 aaPredicted RBP16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 PCSK6P29122 969 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 KRT20P35900 424 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 C21orf59P57076 290 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 TP53BP1Q12888 1972 aaPredicted RBP16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 SRSF5Q13243 272 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 C14orf28Q4W4Y0 310 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 DCST1Q5T197 706 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 KLHL17Q6TDP4 642 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 NLGN4XQ8N0W4 816 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 APH1BQ8WW43 257 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 DNASE2BQ8WZ79 361 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 ISOC1Q96CN7 298 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 MPP4Q96JB8 637 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 LIN28AQ9H9Z2 209 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 CTPS2Q9NRF8 586 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 CALML5Q9NZT1 146 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 HCN3Q9P1Z3 774 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 ERVK-18Q9QC07 812 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 IGHV5-51A0A0C4DH38 117 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 CASC3O15234 703 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 BCAT2O15382 392 aaPredicted RBP16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 TPST2O60704 377 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 UGT2B17O75795 530 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 ALDH4A1P30038 563 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 MLLT3P42568 568 aaPredicted RBP16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 NPTX1Q15818 432 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 GPR107Q5VW38 600 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 OGFOD3Q6PK18 319 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 KLHL3Q9UH77 587 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 MKLN1Q9UL63 735 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 SNX5Q9Y5X3 404 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 SDK1Q7Z5N4 2213 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 FRS3O43559 492 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 FOXS1O43638 330 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 SRPX2O60687 465 aaPredicted RBP16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 CT62P0C5K7 136 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 IDH2P48735 452 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 CXCR4P61073 352 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 HPCAP84074 193 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 EXOSC7Q15024 291 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 PRICKLE4Q2TBC4 344 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 PROX2Q3B8N5 592 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 FRRS1Q6ZNA5 592 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 PARP8Q8N3A8 854 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 GALNT15Q8N3T1 639 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 SLC7A13Q8TCU3 470 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 FUZQ9BT04 418 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 SOHLH2Q9NX45 425 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 MAT2BQ9NZL9 334 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 GPR55Q9Y2T6 319 aaPredicted RBP16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 RNF215Q9Y6U7 377 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 SPTBP11277 2137 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 COL6A3P12111 3177 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 PCDH15Q96QU1 1955 aa16.21■□□□□ 0.19
PCDHGC3-205ENST00000617641 RHPN2P1A8MT19 583 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 FAAHO00519 579 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR10H3O60404 316 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 FAM20BO75063 409 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 TTKP33981 857 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 AFF3P51826 1226 aaKnown RBP16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLC35A2P78381 396 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 MGAT2Q10469 447 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 LSAMPQ13449 338 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 DEFB123Q8N688 67 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR13F1Q8NGS4 319 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 FAM210AQ96ND0 272 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 TUBA1CQ9BQE3 449 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 FNDC11Q9BVV2 318 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 PRR14Q9BWN1 585 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 NAA50Q9GZZ1 169 aaKnown RBP16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 LHPPQ9H008 270 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 IRAK4Q9NWZ3 460 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 SCN3BQ9NY72 215 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 TPRKBQ9Y3C4 175 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 CHST2Q9Y4C5 530 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 A0A1B0GVT2 93 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 M0R129 80 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 PLOD3O60568 738 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 GABRA4P48169 554 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 SMIM11AP58511 58 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 MAT1AQ00266 395 aaKnown RBP16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 CCNJQ5T5M9 372 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 TMEM236Q5W0B7 351 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 TSSK4Q6SA08 328 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 DGAT2L6Q6ZPD8 337 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR52P1PQ8NH57 321 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 DUSP21Q9H596 190 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 MAN2C1Q9NTJ4 1040 aa16.2■□□□□ 0.18
PCDHGC3-205ENST00000617641 A0A087WV62 115 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 SH3PXD2BA1X283 911 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 TLCD2A6NGC4 264 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 OXSR1O95747 527 aaPredicted RBP16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 AGR2O95994 175 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 ADAP00813 363 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 PCMT1P22061 227 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 RGS19P49795 217 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 PTGES3Q15185 160 aaKnown RBP16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 ARHGAP11BQ3KRB8 267 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 GTF2IRD2BQ6EKJ0 949 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms