RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 OR2L13Q8N349 312 aa15.37■□□□□ 0.05
CBWD3-211ENST00000615061 FBXW8Q8N3Y1 598 aa15.37■□□□□ 0.05
CBWD3-211ENST00000615061 DIO2Q92813 273 aa15.37■□□□□ 0.05
CBWD3-211ENST00000615061 OMA1Q96E52 524 aa15.37■□□□□ 0.05
CBWD3-211ENST00000615061 VIPAS39Q9H9C1 493 aa15.37■□□□□ 0.05
CBWD3-211ENST00000615061 DDX18Q9NVP1 670 aaKnown RBP15.37■□□□□ 0.05
CBWD3-211ENST00000615061 C19orf53Q9UNZ5 99 aaPredicted RBP15.37■□□□□ 0.05
CBWD3-211ENST00000615061 A0A087WV62 115 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 FRG2CA6NGY1 282 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 PLOD2O00469 737 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 ERN1O75460 977 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 PDE9AO76083 593 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 GLSO94925 669 aaPredicted RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 ABCB1P08183 1280 aaPredicted RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 PRPS2P11908 318 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 DRD5P21918 477 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 HPCAL1P37235 193 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 FRKP42685 505 aaPredicted RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 PPIAP62937 165 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 KCNJ2P63252 427 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 PLCXD2Q0VAA5 305 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 ZNF155Q12901 538 aaPredicted RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 ATG16L1Q676U5 607 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 GK5Q6ZS86 529 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 CHERPQ8IWX8 916 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 DND1Q8IYX4 353 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 OR4N2Q8NGD1 307 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 TMBIM1Q969X1 311 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 HSPBAP1Q96EW2 488 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 BTBD9Q96Q07 612 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 DEFB127Q9H1M4 99 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 TAS2R9Q9NYW1 312 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 ATP6V1HQ9UI12 483 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 SH3BGRL2Q9UJC5 107 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 EIF3LQ9Y262 564 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 ACOX3O15254 700 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 LRRTM2O43300 516 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 CDC40O60508 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 PPM1BO75688 479 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 PSMG1O95456 288 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 STSP08842 583 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 GPC1P35052 558 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 TMED10P49755 219 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 MANFP55145 182 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 DCAF7P61962 342 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 KRTCAP3Q53RY4 240 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 R3HCC1LQ7Z5L2 792 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 FGD2Q7Z6J4 655 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 RIMKLAQ8IXN7 391 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 RAB3IL1Q8TBN0 382 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 SPPL2AQ8TCT8 520 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 ZNF75CPQ92670 426 aaPredicted RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 MTERF3Q96E29 417 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 MEAF6Q9HAF1 191 aa15.36■□□□□ 0.05
CBWD3-211ENST00000615061 NOP53Q9NZM5 478 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.36■□□□□ 0.05
CBWD3-211ENST00000615061 CAPN14A8MX76 684 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 SDHDO14521 159 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 TP53I11O14683 189 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 TO15178 435 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 SLC19A2O60779 497 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 UGT2B11O75310 529 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 CELA3AP09093 270 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 RFPL3SP0C7P2 107 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 MAGEA5P43359 124 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 PSG6Q00889 435 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 LARP4Q71RC2 724 aaKnown RBP eCLIP15.35■□□□□ 0.05
CBWD3-211ENST00000615061 FJX1Q86VR8 437 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 WDR75Q8IWA0 830 aaKnown RBP15.35■□□□□ 0.05
CBWD3-211ENST00000615061 SLC44A2Q8IWA5 706 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-211ENST00000615061 TMEM251Q8N6I4 163 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 GOLGA6L1Q8N7Z2 621 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 HGDQ93099 445 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 ZBED6CLQ96FA7 236 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-211ENST00000615061 JSRP1Q96MG2 331 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-211ENST00000615061 NODALQ96S42 347 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 DOHHQ9BU89 302 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 WDR55Q9H6Y2 383 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-211ENST00000615061 EQTNQ9NQ60 294 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 CNIH4Q9P003 139 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 LIPGQ9Y5X9 500 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 PCNX3Q9H6A9 2034 aa15.35■□□□□ 0.05
CBWD3-211ENST00000615061 GOLGA8QA0A0J9YX86 632 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 A0A1B0GTH9 108 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 GOLGA8OA6NCC3 632 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 LRRC3CA6NJW4 275 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 GOLGA8NF8WBI6 632 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 COQ9O75208 318 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 SLITRK5O94991 958 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 EPHA3P29320 983 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 CASP3P42574 277 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 MAD2L1Q13257 205 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-211ENST00000615061 CPTPQ5TA50 214 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 MAVSQ7Z434 540 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 TRIM42Q8IWZ5 723 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 KIRREL3Q8IZU9 778 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 SLC34A3Q8N130 599 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 GHDCQ8N2G8 530 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 RILPQ96NA2 401 aa15.34■□□□□ 0.05
CBWD3-211ENST00000615061 IL1RL2Q9HB29 575 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms