RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 TPST1O60507 370 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CTNSO60931 367 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 GMNNO75496 209 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CEACAM4O75871 244 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 DNAJB5O75953 348 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 RAP2AP10114 183 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 ICAM2P13598 275 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 RPL5P46777 297 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 TRPC1P48995 793 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CCL11P51671 97 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 BTG2P78543 158 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PLIN5Q00G26 463 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 SRSF11Q05519 484 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CHAF1BQ13112 559 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 KCNAB2Q13303 367 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 BIKQ13323 160 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PCOLCEQ15113 449 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 DPY19L1Q2PZI1 675 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 GTDC1Q4AE62 458 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 FAM98BQ52LJ0 330 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 SPIN4Q56A73 249 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PCSK4Q6UW60 755 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 LANCL3Q6ZV70 420 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 ANKRD37Q7Z713 158 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 GPR180Q86V85 440 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 MICU2Q8IYU8 434 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 GALNT16Q8N428 558 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 FAM47BQ8NA70 645 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 OR10A6Q8NH74 314 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CHTF18Q8WVB6 975 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 TSLPQ969D9 159 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CSF3RQ99062 836 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 BDH2Q9BUT1 245 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 NTN4Q9HB63 628 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 SLC6A13Q9NSD5 602 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PCDHGB7Q9Y5F8 929 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PCDHGA9Q9Y5G4 932 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 NBEAQ8NFP9 2946 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 IGKV3D-11A0A0A0MRZ8 115 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TCRBV16S1A1N1A0A5B0 115 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 H3BNH8 94 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 PDLIM1O00151 329 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 CXCR6O00574 342 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 PROM1O43490 865 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TMPRSS11DO60235 418 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 SCN2BO60939 215 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 GUCY1B2O75343 617 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 CLPTM1O96005 669 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 KLK1P06870 262 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 FAM87AP0C7U9 286 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 HOXB6P17509 224 aaKnown RBP8.24□□□□□ -1.09
SMAD4-217ENST00000611848 MAOAP21397 527 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 MYF6P23409 242 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TPP2P29144 1249 aaPredicted RBP8.24□□□□□ -1.09
SMAD4-217ENST00000611848 PPP2R1BP30154 601 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 SOX11P35716 441 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 WNT3P56703 355 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TRA2BP62995 288 aaKnown RBP8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TNFRSF17Q02223 184 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 ACSM2AQ08AH3 577 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 MERTKQ12866 999 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 SLC13A2Q13183 592 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 SERTAD2Q14140 314 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 ADRM1Q16186 407 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 SLC36A3Q495N2 470 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 CCNYL2Q5T2Q4 361 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 ACSM2BQ68CK6 577 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TCTN3Q6NUS6 607 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 COMMD6Q7Z4G1 85 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TMEM132CQ8N3T6 1108 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 EXD3Q8N9H8 876 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TMEM52Q8NDY8 209 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 OR8J2Q8NGG1 315 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 TANKQ92844 425 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 ABHD17AQ96GS6 310 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 REXO5Q96IC2 774 aaKnown RBP8.24□□□□□ -1.09
SMAD4-217ENST00000611848 EGLN2Q96KS0 407 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 IMMP1LQ96LU5 166 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 RNF145Q96MT1 663 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 SEPHS2Q99611 448 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 LPAR4Q99677 370 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 INPP5KQ9BT40 448 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 ADI1Q9BV57 179 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 UGT2B28Q9BY64 529 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 ZNF160Q9HCG1 818 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 NECTIN3Q9NQS3 549 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 PNPLA3Q9NST1 481 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 OLAHQ9NV23 265 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 SIRT5Q9NXA8 310 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 ASB4Q9Y574 426 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 ATMQ13315 3056 aa8.24□□□□□ -1.09
SMAD4-217ENST00000611848 RNF103-CHMP3A0A140T963 221 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 TRIM64A6NGJ6 449 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 PLOD2O00469 737 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 EI24O14681 340 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 SNPHO15079 494 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 GSTA4O15217 222 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 DEAF1O75398 565 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 H6PDO95479 791 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 GBAP04062 536 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms