RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 FRG2CA6NGY1 282 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 OR6C70A6NIJ9 312 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 MBD3L5A6NJ08 208 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 SNPHO15079 494 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 NME6O75414 186 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 REM1O75628 298 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 BCAS2O75934 225 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 ESRRBO95718 433 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 ACTL6AO96019 429 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 ABHD2P08910 425 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 RHOXF2BP0C7M4 288 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 CT45A8P0DMV1 189 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 CT45A9P0DMV2 189 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 DRD2P14416 443 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 CPN1P15169 458 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 ATP5F1P24539 256 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 CTSSP25774 331 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 SLCO1A2P46721 670 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 ASCL1P50553 236 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 AGFG1P52594 562 aaKnown RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 ART1P52961 327 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 PRKAA2P54646 552 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 MRPS35P82673 323 aaKnown RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 HMGCS1Q01581 520 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 PLCXD2Q0VAA5 305 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 CSTF3Q12996 717 aaKnown RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 DAZAP2Q15038 168 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 CT45A2Q5DJT8 189 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 ZNF628Q5EBL2 1059 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 GPRIN3Q6ZVF9 776 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 TRMT10CQ7L0Y3 403 aaKnown RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 LCA5Q86VQ0 697 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 SLC22A9Q8IVM8 553 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 TRIM42Q8IWZ5 723 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 GBP7Q8N8V2 638 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 MBD3L2Q8NHZ7 208 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 ZNF675Q8TD23 568 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 C16orf78Q8WTQ4 265 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 FAM222BQ8WU58 562 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 KAT2AQ92830 837 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 TMBIM1Q969X1 311 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 TMCO6Q96DC7 493 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 ERP27Q96DN0 273 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 C11orf24Q96F05 449 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 LRRC46Q96FV0 321 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 APIPQ96GX9 242 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 COL21A1Q96P44 957 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 TMEM237Q96Q45 408 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 TRIB1Q96RU8 372 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 GPATCH1Q9BRR8 931 aaKnown RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 OSBPL11Q9BXB4 747 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 ACPTQ9BZG2 426 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 SERHLQ9NQF3 203 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 RASSF1Q9NS23 344 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 EHD3Q9NZN3 535 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 FOXD3Q9UJU5 478 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 NFU1Q9UMS0 254 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 TIMM22Q9Y584 194 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 GNG14A0A1W2PPG7 69 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 SERTM1A2A2V5 107 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 PRAMEF25A6NGN4 478 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 TUBAL3A6NHL2 446 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 A6NNC1 897 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 GOLGA8RI6L899 631 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 RIPK2O43353 540 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 PCDH7O60245 1069 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 ZIC3O60481 467 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 PLOD3O60568 738 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 TSPAN2O60636 221 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 IL18BPO95998 194 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 ENO1P06733 434 aaKnown RBP6.93□□□□□ -1.3
CUX1-219ENST00000606749 GSTA1P08263 222 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 IL3P08700 152 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 PYGBP11216 843 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 EPXP11678 715 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 HMOX2P30519 316 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 MPIP34949 423 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 OPRM1P35372 400 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 HTR6P50406 440 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 PKNOX1P55347 436 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 CORO7P57737 925 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 SRYQ05066 204 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 BTKQ06187 659 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 ACSM2AQ08AH3 577 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 RCAN2Q14206 197 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 SLC29A2Q14542 456 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 HEPACAMQ14CZ8 416 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 CEBPEQ15744 281 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 FLYWCH1Q4VC44 716 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 SPIN4Q56A73 249 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 ACSM2BQ68CK6 577 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 GALNT18Q6P9A2 607 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 SCIMPQ6UWF3 145 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 KIF18BQ86Y91 864 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 PLCZ1Q86YW0 608 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 SAMD14Q8IZD0 417 aaPredicted RBP6.93□□□□□ -1.3
CUX1-219ENST00000606749 C9orf106Q8NAJ2 232 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 OR9A2Q8NGT5 310 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 OR14L1PQ8NHC6 308 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 GOT1L1Q8NHS2 421 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms