RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 IL20RBQ6UXL0 311 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 RTL4Q6ZR62 310 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 MSANTD1Q6ZTZ1 278 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 TMEM178AQ8NBL3 297 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 NUP43Q8NFH3 380 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 GOT1L1Q8NHS2 421 aaPredicted RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 TMEM125Q96AQ2 219 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 FAM120BQ96EK7 910 aaKnown RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 MAGED4Q96JG8 741 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 C5orf34Q96MH7 638 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 CCDC115Q96NT0 180 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 MS4A4EQ96PG1 132 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 OR52E6Q96RD3 313 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 LMF2Q9BU23 707 aaKnown RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 TIMMDC1Q9NPL8 285 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 KLHL14Q9P2G3 628 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 ERVK-11Q9UQG0 969 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 NPFFR2Q9Y5X5 522 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 COPG1Q9Y678 874 aaKnown RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 CFLARO15519 480 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 NME2P1O60361 137 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 NME2P22392 152 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 ABCD3P28288 659 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 ZFP36L2P47974 494 aaKnown RBP12.8□□□□□ -0.36
RNF40-212ENST00000602784 DGKQP52824 942 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 ARFIP2P53365 341 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 PSG6Q00889 435 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 C19orf57Q0VDD7 668 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 SQLEQ14534 574 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 ZNHIT3Q15649 155 aaPredicted RBP12.8□□□□□ -0.36
RNF40-212ENST00000602784 NTRK2Q16620 822 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 VPS26BQ4G0F5 336 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 CYP27C1Q4G0S4 372 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 PAOXQ6QHF9 649 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 BLOC1S3Q6QNY0 202 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 CLECL1Q8IZS7 167 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 CDRT4Q8N9R6 151 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 OR56A1Q8NGH5 318 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 GIMAP5Q96F15 307 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 SECISBP2Q96T21 854 aaKnown RBP12.8□□□□□ -0.36
RNF40-212ENST00000602784 TMEM120AQ9BXJ8 343 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 TRIM4Q9C037 500 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 ZNF385DQ9H6B1 395 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 CXorf36Q9H7Y0 433 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 SH2D2AQ9NP31 389 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 GIN1Q9NXP7 522 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 KLF13Q9Y2Y9 288 aaPredicted RBP12.8□□□□□ -0.36
RNF40-212ENST00000602784 SNX8Q9Y5X2 465 aa12.8□□□□□ -0.36
RNF40-212ENST00000602784 NUP214P35658 2090 aaPredicted RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 BSNQ9UPA5 3926 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 SMG1Q96Q15 3661 aaKnown RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 PPM1BO75688 479 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 NCF2P19878 526 aaPredicted RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 LSP1P33241 339 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 ST13P50502 369 aaKnown RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 CORO7P57737 925 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 ZNF155Q12901 538 aaPredicted RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 RCAN2Q14206 197 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 MAPKAPK3Q16644 382 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 SPDYE7PQ495Y7 208 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 EXOSC6Q5RKV6 272 aaKnown RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 MFSD12Q6NUT3 480 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 NPSR1Q6W5P4 371 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 MDGA2Q7Z553 956 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 ANKRD46Q86W74 232 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 FUNDC1Q8IVP5 155 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 SLC44A2Q8IWA5 706 aaPredicted RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 SLC34A3Q8N130 599 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 CPSF7Q8N684 471 aaKnown RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 PSD4Q8NDX1 1056 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 OR4A15Q8NGL6 344 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 OR9I1Q8NGQ6 314 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 ZCCHC3Q9NUD5 404 aaKnown RBP12.79□□□□□ -0.36
RNF40-212ENST00000602784 CNIH4Q9P003 139 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 MAP10Q9P2G4 905 aa12.79□□□□□ -0.36
RNF40-212ENST00000602784 ZNF462Q96JM2 2506 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 ANKRD33BA6NCL7 494 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 OR6C70A6NIJ9 312 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 TTLL8A6PVC2 850 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 C9JVG2 144 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 KLRC4-KLRK1H3BQV0 150 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 TP53I11O14683 189 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 ABCB7O75027 752 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 NME6O75414 186 aaPredicted RBP12.78□□□□□ -0.36
RNF40-212ENST00000602784 NKX2-2O95096 273 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 HMGN2P05204 90 aaKnown RBP12.78□□□□□ -0.36
RNF40-212ENST00000602784 ABCB1P08183 1280 aaPredicted RBP12.78□□□□□ -0.36
RNF40-212ENST00000602784 KRT16P08779 473 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 UQCRC2P22695 453 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 PRIM2P49643 509 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 PRKAG1P54619 331 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 GYS2P54840 703 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 RPP38P78345 283 aaKnown RBP12.78□□□□□ -0.36
RNF40-212ENST00000602784 MRPS22P82650 360 aaKnown RBP12.78□□□□□ -0.36
RNF40-212ENST00000602784 SLC22A10Q63ZE4 541 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 NUP54Q7Z3B4 507 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 TRIML2Q8N7C3 387 aa12.78□□□□□ -0.36
RNF40-212ENST00000602784 DNAJB8Q8NHS0 232 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms