RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 LTB4RQ15722 352 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 ERCC6LQ2NKX8 1250 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 CES4AQ5XG92 561 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 FAM219BQ5XKK7 198 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 FAM180BQ6P0A1 224 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 LACC1Q8IV20 430 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 LIX1LQ8IVB5 337 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 CCNYL1Q8N7R7 359 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 SIMC1Q8NDZ2 872 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 RDH11Q8TC12 318 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 BTBD9Q96Q07 612 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 NODALQ96S42 347 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 OSBPL11Q9BXB4 747 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 STMN4Q9H169 189 aaPredicted RBP14.44□□□□□ -0.1
VRK3-221ENST00000600284 EXO1Q9UQ84 846 aaKnown RBP14.44□□□□□ -0.1
VRK3-221ENST00000600284 UBFD1O14562 309 aaKnown RBP14.43□□□□□ -0.1
VRK3-221ENST00000600284 GNB5O14775 395 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 SNPHO15079 494 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 CBR3O75828 277 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 SLITRK5O94991 958 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 PROCP04070 461 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 DDCP20711 480 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 CEACAM8P31997 349 aaPredicted RBP14.43□□□□□ -0.1
VRK3-221ENST00000600284 CRHR1P34998 444 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 PTGDSP41222 190 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 NAGLUP54802 743 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 KRTAP10-9P60411 292 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 ZNF763Q0D2J5 394 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 NNATQ16517 81 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 ACSF3Q4G176 576 aaPredicted RBP14.43□□□□□ -0.1
VRK3-221ENST00000600284 SPDYAQ5MJ70 313 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 ANGPTL8Q6UXH0 198 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 FRMD7Q6ZUT3 714 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 SEM1Q6ZVN7 128 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 TRIM46Q7Z4K8 759 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 HOMEZQ8IX15 550 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 EXOSC8Q96B26 276 aaKnown RBP14.43□□□□□ -0.1
VRK3-221ENST00000600284 DTNBP1Q96EV8 351 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 SLC35A4Q96G79 324 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 METTL2AQ96IZ6 378 aaKnown RBP14.43□□□□□ -0.1
VRK3-221ENST00000600284 COL21A1Q96P44 957 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 KCNA7Q96RP8 456 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 TAS2R9Q9NYW1 312 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 TAS2R7Q9NYW3 318 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 ZNF629Q9UEG4 869 aaPredicted RBP14.43□□□□□ -0.1
VRK3-221ENST00000600284 CSMD2Q7Z408 3487 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 NCKAP5O14513 1909 aa14.43□□□□□ -0.1
VRK3-221ENST00000600284 OTOGQ6ZRI0 2925 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 SYT5O00445 386 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 PLIN3O60664 434 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 UGT2B11O75310 529 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 REM1O75628 298 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 RSL1D1O76021 490 aaKnown RBP14.42□□□□□ -0.1
VRK3-221ENST00000600284 ACTL6AO96019 429 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 CT45A8P0DMV1 189 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 CT45A9P0DMV2 189 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 BMP7P18075 431 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 GCKP35557 465 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 FOXA1P55317 472 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 BTKQ06187 659 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 EFR3AQ14156 821 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 TOMM20Q15388 145 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 IMPG1Q17R60 797 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 EIPR1Q53HC9 387 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 CT45A2Q5DJT8 189 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 CFAP157Q5JU67 520 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 NSUN5P2Q63ZY6 315 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 WDR53Q7Z5U6 358 aaPredicted RBP14.42□□□□□ -0.1
VRK3-221ENST00000600284 FAM9CQ8IZT9 166 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 FAM83FQ8NEG4 500 aaPredicted RBP14.42□□□□□ -0.1
VRK3-221ENST00000600284 OR9A2Q8NGT5 310 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.42□□□□□ -0.1
VRK3-221ENST00000600284 UBLCP1Q8WVY7 318 aaPredicted RBP14.42□□□□□ -0.1
VRK3-221ENST00000600284 KAT2AQ92830 837 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 ABTB1Q969K4 478 aaPredicted RBP14.42□□□□□ -0.1
VRK3-221ENST00000600284 TMBIM1Q969X1 311 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 LRRC46Q96FV0 321 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 VSTM2LQ96N03 204 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 BBS4Q96RK4 519 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 ZNF559Q9BR84 538 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 UGT2B28Q9BY64 529 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 RRAGDQ9NQL2 400 aaPredicted RBP14.42□□□□□ -0.1
VRK3-221ENST00000600284 OXSMQ9NWU1 459 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 KLRF1Q9NZS2 232 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 SLC6A5Q9Y345 797 aa14.42□□□□□ -0.1
VRK3-221ENST00000600284 INTS1Q8N201 2190 aaKnown RBP14.41□□□□□ -0.1
VRK3-221ENST00000600284 A0A087WV62 115 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 PRAMEF25A6NGN4 478 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 CD8B2A6NJW9 211 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 MYO1GB0I1T2 1018 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 DVL2O14641 736 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 ERN1O75460 977 aaKnown RBP14.41□□□□□ -0.1
VRK3-221ENST00000600284 CRCPO75575 148 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 IL2RAP01589 272 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 SHBGP04278 402 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 UROSP10746 265 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 CPA3P15088 417 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 CPN1P15169 458 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 KRT20P35900 424 aa14.41□□□□□ -0.1
VRK3-221ENST00000600284 PNLIPRP2P54317 469 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms