RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 DNASE2BQ8WZ79 361 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 CDS1Q92903 461 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ZNF566Q969W8 418 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 TRNT1Q96Q11 434 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ACAD8Q9UKU7 415 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 A4GNTQ9UNA3 340 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 COMMD3-BMI1R4GMX3 469 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 SPACA6W5XKT8 324 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 VPS13AQ96RL7 3174 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 DSPPQ9NZW4 1301 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 ENO4A6NNW6 628 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 A8MVJ9 347 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 PCDHGA12O60330 932 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 PIAS2O75928 621 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 CPNE6O95741 557 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 LGI1O95970 557 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 CCDC159P0C7I6 412 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 ELAVL4P26378 380 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 SLC5A2P31639 672 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 PDX1P52945 283 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 GABARAPL2P60520 117 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 PIN1Q13526 163 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 FGD3Q5JSP0 725 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 PRAMEF8Q5VWM4 474 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 PRAMEF7Q5VXH5 474 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 NKAIN2Q5VXU1 208 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 CDC73Q6P1J9 531 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 ENTHD1Q8IYW4 607 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 OR6T1Q8NGN1 323 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 SLC9A6Q92581 669 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 ANKRD9Q96BM1 317 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 TGM7Q96PF1 710 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 RHNO1Q9BSD3 238 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 SPATA5L1Q9BVQ7 753 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 IRF2BPLQ9H1B7 796 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 FANCEQ9HB96 536 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 ANKHQ9HCJ1 492 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 PTGFRNQ9P2B2 879 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 RSL24D1Q9UHA3 163 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 BLOC1S6Q9UL45 172 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 CLCA2Q9UQC9 943 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 DMDP11532 3685 aa15.94■□□□□ 0.14
SHKBP1-216ENST00000598201 A0A0A6YYC8 382 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 I3L1I5 382 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 CHST10O43529 356 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 WBP4O75554 376 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 ATP1B1P05026 303 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 GABRA4P48169 554 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 DHPSP49366 369 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 PPM1FP49593 454 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 RAB38P57729 211 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 DUSP5Q16690 384 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 FAM214AQ32MH5 1076 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 C14orf28Q4W4Y0 310 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 HEPHL1Q6MZM0 1159 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 C16orf62Q7Z3J2 963 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 VRK2Q86Y07 508 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 NLGN4XQ8N0W4 816 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 APH1BQ8WW43 257 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 TANKQ92844 425 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 TCTN2Q96GX1 697 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 RBCK1Q9BYM8 510 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 CXorf21Q9HAI6 301 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 C19orf53Q9UNZ5 99 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 LIPT1Q9Y234 373 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 CHST2Q9Y4C5 530 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 CACNA1HO95180 2353 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 MYO15AQ9UKN7 3530 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 THADAQ6YHU6 1953 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 IGHV5-51A0A0C4DH38 117 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 ARRDC5A6NEK1 342 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 FOXS1O43638 330 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 H1F0P07305 194 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 CT62P0C5K7 136 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 ACP2P11117 423 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 NT5EP21589 574 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 PCSK6P29122 969 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 GGT2P36268 569 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 MGAT2Q10469 447 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 NPTX1Q15818 432 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 ATAD3BQ5T9A4 648 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 CLVS1Q8IUQ0 354 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 ATOH1Q92858 354 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 FUZQ9BT04 418 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 ZNF556Q9HAH1 456 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 ADAP2Q9NPF8 381 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 DNAAF2Q9NVR5 837 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 CDC14AQ9UNH5 594 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 RNF6Q9Y252 685 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 GPR55Q9Y2T6 319 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 PCDH15Q96QU1 1955 aa15.93■□□□□ 0.14
SHKBP1-216ENST00000598201 BCAT2O15382 392 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 SRPX2O60687 465 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 JUNBP17275 347 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 PRICKLE4Q2TBC4 344 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 ZNF311Q5JNZ3 666 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 MLIPQ5VWP3 458 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 KLHL17Q6TDP4 642 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 B3GNT6Q6ZMB0 384 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms