RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SNX4O95219 450 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 ABCB1P08183 1280 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 FBXW4P57775 412 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 PPIAP62937 165 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 KCNJ2P63252 427 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 ZNF155Q12901 538 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 NNATQ16517 81 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 VPS26BQ4G0F5 336 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 TMEM198Q66K66 360 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 OGFOD2Q6N063 350 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 LARP4Q71RC2 724 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 SIAH3Q8IW03 269 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 WDR75Q8IWA0 830 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 RIMKLAQ8IXN7 391 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 PRR22Q8IZ63 422 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 OR7A2PQ8NGA2 310 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 SPPL2AQ8TCT8 520 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 OR5P2Q8WZ92 322 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 OMA1Q96E52 524 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 DPY30Q9C005 99 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 ANKRA2Q9H9E1 313 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 MARCOQ9UEW3 520 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 MRTO4Q9UKD2 239 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 OSGIN2Q9Y236 505 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 OR10H1Q9Y4A9 318 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 CHCHD2Q9Y6H1 151 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 NBASA2RRP1 2371 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 G3V3Y1 287 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 SDHDO14521 159 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 EMC8O43402 210 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 REM1O75628 298 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 SASH3O75995 380 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 LAMP1P11279 417 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 PIGAP37287 484 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 CLNS1AP54105 237 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 CASP6P55212 293 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 PRR5P85299 388 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 EFR3AQ14156 821 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 UBAP2LQ14157 1087 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 CYP27C1Q4G0S4 372 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 SLC44A2Q8IWA5 706 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 KRTCAP2Q8N6L1 136 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 VPS37AQ8NEZ2 397 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 NUP43Q8NFH3 380 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 TMCO6Q96DC7 493 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 C7orf26Q96N11 449 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 COL21A1Q96P44 957 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 DOHHQ9BU89 302 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 DUSP26Q9BV47 211 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 Q9N2J8 555 aa15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 CNOT11Q9UKZ1 510 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 RP1L1Q8IWN7 2480 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-212ENST00000596163 SHANK1Q9Y566 2161 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 A0A1B0GUH1 482 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 OR6C70A6NIJ9 312 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 HS6ST1O60243 411 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 AGFG2O95081 481 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 PSMG1O95456 288 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 CT45A8P0DMV1 189 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 CT45A9P0DMV2 189 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 IL12BP29460 328 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 RFC3P40938 356 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 DNASE1L1P49184 302 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 PSMD4P55036 377 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 DIO3P55073 304 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 KCNK10P57789 538 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 HYAL4Q2M3T9 481 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 PGS1Q32NB8 556 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 CT45A2Q5DJT8 189 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 RNFT1Q5M7Z0 435 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 PRAMEF20Q5VT98 475 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 NXNQ6DKJ4 435 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 SLC30A6Q6NXT4 461 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 ZCCHC12Q6PEW1 402 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 CAMKMTQ7Z624 323 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 PACS2Q86VP3 889 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 TMBIM1Q969X1 311 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 ANGPTL4Q9BY76 406 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 TTTY12Q9BZ98 90 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 TSPAN10Q9H1Z9 355 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 ZFP64Q9NPA5 681 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 TUBA8Q9NY65 449 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 NTMQ9P121 344 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 B4GALT7Q9UBV7 327 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 SLC5A6Q9Y289 635 aa15.88■□□□□ 0.13
SHKBP1-212ENST00000596163 MYO18BQ8IUG5 2567 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 PINLYPA6NC86 204 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 CFLARO15519 480 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 GLSO94925 669 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 SOX30O94993 753 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 STSP08842 583 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 EPHA3P29320 983 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 CASP3P42574 277 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 PRIM2P49643 509 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 CDK9P50750 372 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 PNLIPRP2P54317 469 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 PRKAG1P54619 331 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 CORO7P57737 925 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 PSG6Q00889 435 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms