RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ESX1Q8N693 406 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 ZNF321PQ8N8H1 164 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 ANKFN1Q8N957 763 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 MORN4Q8NDC4 146 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 OR2Y1Q8NGV0 311 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 FBXO30Q8TB52 745 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 SLC2A12Q8TD20 617 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 ADAMTS15Q8TE58 950 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 CT55Q8WUE5 264 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 XAGE5Q8WWM1 108 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 DAZLQ92904 295 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 OTUB1Q96FW1 271 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 TMEM19Q96HH6 336 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 SLC46A1Q96NT5 459 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 STACQ99469 402 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 CRB3Q9BUF7 120 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 FAM117AQ9C073 453 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 OR10A5Q9H207 317 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 PIGUQ9H490 435 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 S100A14Q9HCY8 104 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 DUSP22Q9NRW4 184 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 DCAF13Q9NV06 445 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 P2RX2Q9UBL9 471 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 ANGPT4Q9Y264 503 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 DTX4Q9Y2E6 619 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 DOCK10Q96BY6 2186 aa13.71□□□□□ -0.22
SHKBP1-211ENST00000595945 A0A1W2PQ72 361 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 SAGE2PA6NJ88 616 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 CDRT15L2A8MXV6 281 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 TMEM229AB2RXF0 380 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 H3BNX3 289 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 BRINP1O60477 761 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 GMNNO75496 209 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 SOX30O94993 753 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 ATP6V1G2O95670 118 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 ALOX5P09917 674 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 UMPSP11172 480 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 GABREP78334 506 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 MRPS22P82650 360 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 ZNF155Q12901 538 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 ELOAQ14241 798 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 RSPO4Q2I0M5 234 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 CRB2Q5IJ48 1285 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 INTS11Q5TA45 600 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 IRAK1BP1Q5VVH5 260 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 AP1ARQ63HQ0 302 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 FAAH2Q6GMR7 532 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 CPEB2Q7Z5Q1 589 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 WDR53Q7Z5U6 358 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 EID3Q8N140 333 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 ENDOVQ8N8Q3 282 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 CHDHQ8NE62 594 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 C16orf52Q8NHV5 167 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 SLC26A7Q8TE54 656 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 METTL21AQ8WXB1 218 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 CDS1Q92903 461 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 POP5Q969H6 163 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 NCLNQ969V3 563 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 FAM162AQ96A26 154 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 SLCO4A1Q96BD0 722 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 RSRC1Q96IZ7 334 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 ART5Q96L15 291 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 MESP1Q9BRJ9 268 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 NUDT9Q9BW91 350 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 SEMA4CQ9C0C4 833 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 BCL2L10Q9HD36 194 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 PRODH2Q9UF12 536 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 LIPT1Q9Y234 373 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 PTRH2Q9Y3E5 179 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 CLCA3PQ9Y6N3 262 aa13.7□□□□□ -0.22
SHKBP1-211ENST00000595945 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 PCDH17O14917 1159 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 DYRK3O43781 588 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 RAD1O60671 282 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 PGM3O95394 542 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 SERPINA1P01009 418 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 IGHEP01854 428 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 BCHEP06276 602 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 GPIP06744 558 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 CHRM4P08173 479 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 CD82P27701 267 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 SLC7A1P30825 629 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 CLCN2P51788 898 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 ZFP1Q6P2D0 407 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 LRRC74BQ6ZQY2 392 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 CBLL1Q75N03 491 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 PATL1Q86TB9 770 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 ZSCAN1Q8NBB4 408 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 PAPD5Q8NDF8 572 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 BBS10Q8TAM1 723 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 CANT1Q8WVQ1 401 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 PYDC1Q8WXC3 89 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 SLC9A6Q92581 669 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 STMN2Q93045 179 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 TRNT1Q96Q11 434 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 OR8D2Q9GZM6 311 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 RUBCNLQ9H714 662 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 DCLRE1BQ9H816 532 aa13.69□□□□□ -0.22
SHKBP1-211ENST00000595945 CCM2LQ9NUG4 571 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms