RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CNR1P21554 472 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 TACR1P25103 407 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 CA7P43166 264 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 SERPINB4P48594 390 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 EMDP50402 254 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 NR0B1P51843 470 aaKnown RBP10.31□□□□□ -0.76
SMAD4-211ENST00000590499 MRPS35P82673 323 aaKnown RBP10.31□□□□□ -0.76
SMAD4-211ENST00000590499 HSF1Q00613 529 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 EXOSC7Q15024 291 aaKnown RBP10.31□□□□□ -0.76
SMAD4-211ENST00000590499 NTRK2Q16620 822 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 HYAL4Q2M3T9 481 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 TRMT12Q53H54 448 aaKnown RBP10.31□□□□□ -0.76
SMAD4-211ENST00000590499 CEP85LQ5SZL2 805 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 LCE1DQ5T752 114 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 NOXRED1Q6NXP6 359 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 IKBIPQ70UQ0 350 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 SAMD14Q8IZD0 417 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-211ENST00000590499 GHDCQ8N2G8 530 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 FBXW8Q8N3Y1 598 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 ADCY4Q8NFM4 1077 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 OR10G3Q8NGC4 313 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 EXOSC8Q96B26 276 aaKnown RBP10.31□□□□□ -0.76
SMAD4-211ENST00000590499 ERP27Q96DN0 273 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 FAM173AQ9BQD7 235 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 TTTY12Q9BZ98 90 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 BRINP2Q9C0B6 783 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 ZDHHC11Q9H8X9 412 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 LRTM1Q9HBL6 345 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 PROK2Q9HC23 129 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 SLC35C2Q9NQQ7 365 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 SACM1LQ9NTJ5 587 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 C1orf109Q9NX04 203 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 TAS2R7Q9NYW3 318 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 CNOT11Q9UKZ1 510 aaKnown RBP10.31□□□□□ -0.76
SMAD4-211ENST00000590499 TRAF6Q9Y4K3 522 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 CACNA1CQ13936 2221 aa10.31□□□□□ -0.76
SMAD4-211ENST00000590499 ITPR2Q14571 2701 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 CYSRT1A8MQ03 144 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 MYO1GB0I1T2 1018 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 TFECO14948 347 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-211ENST00000590499 LSM1O15116 133 aaKnown RBP10.3□□□□□ -0.76
SMAD4-211ENST00000590499 CTIFO43310 598 aaKnown RBP10.3□□□□□ -0.76
SMAD4-211ENST00000590499 RGS14O43566 566 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 HS6ST1O60243 411 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 RBPJQ06330 500 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 MPP2Q14168 576 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 C3AR1Q16581 482 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 XKR7Q5GH72 579 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 C6orf163Q5TEZ5 329 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 LRIG3Q6UXM1 1119 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 TMEM64Q6YI46 380 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 RGS9BPQ6ZS82 235 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 GK5Q6ZS86 529 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 FJX1Q86VR8 437 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 SPPL2CQ8IUH8 684 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 CLYBLQ8N0X4 340 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 TAGAPQ8N103 731 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 OR52R1Q8NGF1 315 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 OR52N2Q8NGI0 321 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 OR9A2Q8NGT5 310 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 TWIST2Q8WVJ9 160 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 NTNG2Q96CW9 530 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 PGM2Q96G03 612 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 ZNF764Q96H86 408 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-211ENST00000590499 PKNOX2Q96KN3 472 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 EGLN2Q96KS0 407 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 CCT7Q99832 543 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 ITPAQ9BY32 194 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 NXF5Q9H1B4 397 aaKnown RBP10.3□□□□□ -0.76
SMAD4-211ENST00000590499 IL1RL2Q9HB29 575 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 EML4Q9HC35 981 aaKnown RBP10.3□□□□□ -0.76
SMAD4-211ENST00000590499 TUBA8Q9NY65 449 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-211ENST00000590499 FIS1Q9Y3D6 152 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 ACTL7BQ9Y614 415 aa10.3□□□□□ -0.76
SMAD4-211ENST00000590499 TRGV8A0A0C4DH27 118 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 ANKRD33BA6NCL7 494 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 LRRC3CA6NJW4 275 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 FAM166BA8MTA8 275 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PIP5K1BO14986 540 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 TO15178 435 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 TM9SF1O15321 606 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 ZNHIT1O43257 154 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PAX4O43316 350 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PLOD3O60568 738 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 ZG16O60844 167 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 SEC22BO75396 215 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 CLDN1O95832 211 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 CHEK2O96017 543 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 P04436 131 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 LINC00032P0C843 101 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 SDC1P18827 310 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 ABCD3P28288 659 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PIGAP37287 484 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 DNASE1L1P49184 302 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PER3P56645 1201 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 FBXW4P57775 412 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PPIAP62937 165 aaKnown RBP10.29□□□□□ -0.76
SMAD4-211ENST00000590499 C2orf80Q0P641 193 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 RPS6KA2Q15349 733 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 RFTN2Q52LD8 501 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms