RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ART3Q13508 389 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 MEP1AQ16819 746 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 TRMT5Q32P41 509 aaKnown RBP11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 RUNDC3AQ59EK9 446 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CT45A2Q5DJT8 189 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 ACER2Q5QJU3 275 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 EXOSC6Q5RKV6 272 aaKnown RBP11.27□□□□□ -0.61
DNMT1-218ENST00000589294 REP15Q6BDI9 236 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 TCTN3Q6NUS6 607 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CDC73Q6P1J9 531 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 ISLR2Q6UXK2 745 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 HACD2Q6Y1H2 254 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 GPR155Q7Z3F1 870 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 DHDDSQ86SQ9 333 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 TAGAPQ8N103 731 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 AMER2Q8N7J2 671 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 OR5AK3PQ8NH89 298 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 LRRC58Q96CX6 371 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 RCN3Q96D15 328 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 HSPBAP1Q96EW2 488 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 C16orf58Q96GQ5 468 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 ANKRD27Q96NW4 1050 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 STACQ99469 402 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CGREF1Q99674 301 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 NPAS2Q99743 824 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 HOPXQ9BPY8 73 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-218ENST00000589294 PIGUQ9H490 435 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 RAD21L1Q9H4I0 556 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CDCP1Q9H5V8 836 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 DUSP22Q9NRW4 184 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 ARL8BQ9NVJ2 186 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 SLC25A37Q9NYZ2 338 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 VAPAQ9P0L0 249 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CORO2BQ9UQ03 480 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 PCDHGA9Q9Y5G4 932 aaKnown RBP11.27□□□□□ -0.61
DNMT1-218ENST00000589294 MGAQ8IWI9 3026 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 PKD1L2Q7Z442 2459 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 FRG2CA6NGY1 282 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 AIM2O14862 343 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ASNA1O43681 348 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 NKX2-2O95096 273 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ALPPP05187 535 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ALOX5P09917 674 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ESRRAP11474 423 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-218ENST00000589294 NAGAP17050 411 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 MAN2A2P49641 1150 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 NRG3P56975 720 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ZNF155Q12901 538 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-218ENST00000589294 LASP1Q14847 261 aaKnown RBP11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ABHD17BQ5VST6 288 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 SZRD1Q7Z422 152 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 MSRB3Q8IXL7 192 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 CLEC4FQ8N1N0 589 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 SIRT6Q8N6T7 355 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 SLC16A11Q8NCK7 471 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 FDCSPQ8NFU4 85 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 OR52N2Q8NGI0 321 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ADAMTS15Q8TE58 950 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 THAP3Q8WTV1 239 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-218ENST00000589294 SLC35G5Q96KT7 338 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 GAL3ST4Q96RP7 486 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ITPAQ9BY32 194 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ZNF552Q9H707 407 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-218ENST00000589294 IL1RL2Q9HB29 575 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 EQTNQ9NQ60 294 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 THUMPD1Q9NXG2 353 aaKnown RBP11.26□□□□□ -0.61
DNMT1-218ENST00000589294 GPR83Q9NYM4 423 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 ABI3Q9P2A4 366 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-218ENST00000589294 DTX4Q9Y2E6 619 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 AP3M1Q9Y2T2 418 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 PCDHGB7Q9Y5F8 929 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 MAP1BP46821 2468 aaKnown RBP11.26□□□□□ -0.61
DNMT1-218ENST00000589294 MED13Q9UHV7 2174 aa11.26□□□□□ -0.61
DNMT1-218ENST00000589294 MKRN2OSH3BPM6 223 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 WWP2O00308 870 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 ITGA10O75578 1167 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 OR2J2O76002 312 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 UNC5CO95185 931 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 GPX2P18283 190 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 CALB2P22676 271 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 GABRA3P34903 492 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 TRHRP34981 398 aaPredicted RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 NR0B1P51843 470 aaKnown RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 PSG6Q00889 435 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 FADDQ13158 208 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 GTDC1Q4AE62 458 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 NANOGP8Q6NSW7 305 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 OPN5Q6U736 354 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 IGFL2Q6UWQ7 119 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 C6orf89Q6UWU4 347 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 DNAJC14Q6Y2X3 702 aaPredicted RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 RNF130Q86XS8 419 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 SLC44A2Q8IWA5 706 aaPredicted RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 GPALPP1Q8IXQ4 340 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 DND1Q8IYX4 353 aaKnown RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 OR8J3Q8NGG0 315 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 SLC22A8Q8TCC7 542 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 GPR151Q8TDV0 419 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms