RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNF385CQ66K41 422 aaPredicted RBP10.64□□□□□ -0.71
SMAD4-205ENST00000588745 OLIG3Q7RTU3 272 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 GALNT4Q8N4A0 578 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 CBR4Q8N4T8 237 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 HOXB13Q92826 284 aaPredicted RBP10.64□□□□□ -0.71
SMAD4-205ENST00000588745 TSLPQ969D9 159 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 CLIP3Q96DZ5 547 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 SLC35A4Q96G79 324 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 BTBD9Q96Q07 612 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 SLC29A1Q99808 456 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 SPATA5L1Q9BVQ7 753 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 TGIF2Q9GZN2 237 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 SLC38A1Q9H2H9 487 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 DUSP22Q9NRW4 184 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 THSD1Q9NS62 852 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 SLC22A11Q9NSA0 550 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 C14orf105Q9NVL8 296 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 CTSFQ9UBX1 484 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 SEC14L3Q9UDX4 400 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 SATB2Q9UPW6 733 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 ERVK-19Q9WJR5 959 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 AK5Q9Y6K8 562 aa10.64□□□□□ -0.71
SMAD4-205ENST00000588745 WDFY4Q6ZS81 3184 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 A0A0C4DFX4 3053 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 TCRBV16S1A1N1A0A5B0 115 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 SYNDIG1LA6NDD5 238 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 PDLIM1O00151 329 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 HRKO00198 91 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 EI24O14681 340 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 DPM1O60762 260 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 LRP3O75074 770 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 CPNE3O75131 537 aaKnown RBP10.63□□□□□ -0.71
SMAD4-205ENST00000588745 RFPL3O75679 317 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 NKX2-2O95096 273 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 RASAL1O95294 804 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 ONECUT2O95948 504 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 AK1P00568 194 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 FESP07332 822 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 TNFRSF1BP20333 461 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 SSTR4P31391 388 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 RORAP35398 523 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 KCNJ5P48544 419 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 HSPA13P48723 471 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 EFNA3P52797 238 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 DCDP81605 110 aaKnown RBP10.63□□□□□ -0.71
SMAD4-205ENST00000588745 MC2RQ01718 297 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 CHRNEQ04844 493 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 FUT7Q11130 342 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 ILKQ13418 452 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 ZNF267Q14586 743 aaPredicted RBP10.63□□□□□ -0.71
SMAD4-205ENST00000588745 NRF1Q16656 503 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 DUSP7Q16829 419 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 ARHGAP11BQ3KRB8 267 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 NKAIN1Q4KMZ8 207 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 MLIPQ5VWP3 458 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 OR2T5Q6IEZ7 315 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 FRRS1Q6ZNA5 592 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 SVOPLQ8N434 492 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 COX18Q8N8Q8 333 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 SLC38A9Q8NBW4 561 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 CHDHQ8NE62 594 aaPredicted RBP10.63□□□□□ -0.71
SMAD4-205ENST00000588745 GPR32P1Q8NGA4 272 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 OR2T29Q8NH02 315 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 APOBEC4Q8WW27 367 aaKnown RBP10.63□□□□□ -0.71
SMAD4-205ENST00000588745 SDCCAG3Q96C92 435 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 RNF31Q96EP0 1072 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 NAF1Q96HR8 494 aaKnown RBP10.63□□□□□ -0.71
SMAD4-205ENST00000588745 ZNF597Q96LX8 424 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 CDC6Q99741 560 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 PRRX2Q99811 253 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 CTRCQ99895 268 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 LMF2Q9BU23 707 aaKnown RBP10.63□□□□□ -0.71
SMAD4-205ENST00000588745 CNPPD1Q9BV87 410 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 FOLH1BQ9HBA9 442 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 NCDNQ9UBB6 729 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 LRCH1Q9Y2L9 728 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 PCDHGB3Q9Y5G1 929 aa10.63□□□□□ -0.71
SMAD4-205ENST00000588745 HEMK1Q9Y5R4 338 aaPredicted RBP10.63□□□□□ -0.71
SMAD4-205ENST00000588745 ASCC3Q8N3C0 2202 aaKnown RBP10.62□□□□□ -0.71
SMAD4-205ENST00000588745 PRAMEF25A6NGN4 478 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 C4orf47A7E2U8 309 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 C17orf105B2RV13 164 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 B4E171 279 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 POLR1CO15160 346 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-205ENST00000588745 DYRK3O43781 588 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 E2F6O75461 281 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 SOX30O94993 753 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 DIRAS1O95057 198 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 ZIC2O95409 532 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-205ENST00000588745 RECKO95980 971 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 CLPSP04118 112 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 IFNW1P05000 195 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 ALPPP05187 535 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 CCL4P13236 92 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 ITGA2P17301 1181 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 TNNI3P19429 210 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 TSPAN7P41732 249 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 OR1E2P47887 323 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 EMDP50402 254 aa10.62□□□□□ -0.71
SMAD4-205ENST00000588745 PGDP52209 483 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms