RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 GALNT8Q9NY28 637 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 UTS2RQ9UKP6 389 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 SNX6Q9UNH7 406 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 HEATR5AQ86XA9 2040 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 PCNX3Q9H6A9 2034 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 FAM221AA4D161 298 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 TRIM49D1C9J1S8 452 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 PPP6CO00743 305 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 ACTL6AO96019 429 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 OTCP00480 354 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 ATP1B1P05026 303 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 RPS17P08708 135 aaKnown RBP12.47□□□□□ -0.41
HDAC5-208ENST00000588419 DRD2P14416 443 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 IL12BP29460 328 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 KRT20P35900 424 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 ADAM8P78325 824 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 MAP4K2Q12851 820 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 DEFB113Q30KQ7 82 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 GGTA1PQ4G0N0 100 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 OR5M10Q6IEU7 315 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
HDAC5-208ENST00000588419 P4HA3Q7Z4N8 544 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 GRAMD2AQ8IUY3 354 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 TRIM42Q8IWZ5 723 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 CDYL2Q8N8U2 506 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 CDC26Q8NHZ8 85 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 TRPC4APQ8TEL6 797 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 KAT2AQ92830 837 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 EXOSC8Q96B26 276 aaKnown RBP12.47□□□□□ -0.41
HDAC5-208ENST00000588419 TM4SF18Q96CE8 201 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 CNRIP1Q96F85 164 aaPredicted RBP12.47□□□□□ -0.41
HDAC5-208ENST00000588419 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 CALHM2Q9HA72 323 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 TAS2R10Q9NYW0 307 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 SENP1Q9P0U3 644 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 PRODH2Q9UF12 536 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 CES1P1Q9UKY3 287 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 PSME2Q9UL46 239 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 RPH3AQ9Y2J0 694 aaPredicted RBP12.47□□□□□ -0.41
HDAC5-208ENST00000588419 MTORP42345 2549 aa12.47□□□□□ -0.41
HDAC5-208ENST00000588419 FRG2CA6NGY1 282 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 A8MT66 165 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 ACOX3O15254 700 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 ATE1O95260 518 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 IL3P08700 152 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 RHOXF2BP0C7M4 288 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 HMOX2P30519 316 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 SERPINB9P50453 376 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 ETF1P62495 437 aaKnown RBP12.46□□□□□ -0.41
HDAC5-208ENST00000588419 SORDQ00796 357 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 MGAT2Q10469 447 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 DAZAP2Q15038 168 aaPredicted RBP12.46□□□□□ -0.41
HDAC5-208ENST00000588419 C10orf62Q5T681 223 aaPredicted RBP12.46□□□□□ -0.41
HDAC5-208ENST00000588419 CAMKMTQ7Z624 323 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 UBQLNLQ8IYU4 475 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 CCDC116Q8IYX3 515 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 WFDC11Q8NEX6 87 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 OR9A2Q8NGT5 310 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.41
HDAC5-208ENST00000588419 IFT81Q8WYA0 676 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 TMCO6Q96DC7 493 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 COL21A1Q96P44 957 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 ADOQ96SZ5 270 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 EBPLQ9BY08 206 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 OR2B2Q9GZK3 357 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 MRPL46Q9H2W6 279 aaKnown RBP12.46□□□□□ -0.41
HDAC5-208ENST00000588419 NMRK1Q9NWW6 199 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 HEY2Q9UBP5 337 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 TRPS1Q9UHF7 1281 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 FBXL2Q9UKC9 423 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 EXO1Q9UQ84 846 aaKnown RBP12.46□□□□□ -0.41
HDAC5-208ENST00000588419 WIF1Q9Y5W5 379 aa12.46□□□□□ -0.41
HDAC5-208ENST00000588419 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC5-208ENST00000588419 ACANP16112 2415 aa12.46□□□□□ -0.42
HDAC5-208ENST00000588419 GNG14A0A1W2PPG7 69 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 SH3D21A4FU49 640 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 SCO2O43819 266 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 PCDH7O60245 1069 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 CBR3O75828 277 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 SMNDC1O75940 238 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDAC5-208ENST00000588419 SUPT7LO94864 414 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 IL18BPO95998 194 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 CHN1P15882 459 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 NAGAP17050 411 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 HOXB4P17483 251 aaPredicted RBP12.45□□□□□ -0.42
HDAC5-208ENST00000588419 MAGEA12P43365 314 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 EMDP50402 254 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 CORO7P57737 925 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 DCAF7P61962 342 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 BTKQ06187 659 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 ZNF155Q12901 538 aaPredicted RBP12.45□□□□□ -0.42
HDAC5-208ENST00000588419 ERCC6LQ2NKX8 1250 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 SH2D4BQ5SQS7 431 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 PLCZ1Q86YW0 608 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 WDSUB1Q8N9V3 476 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 OR4K17Q8NGC6 315 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 ZPLD1Q8TCW7 415 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 EFHD2Q96C19 240 aaPredicted RBP12.45□□□□□ -0.42
HDAC5-208ENST00000588419 TM9SF2Q99805 663 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 MRPL57Q9BQC6 102 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms