RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 ZNF675Q8TD23 568 aa17.13■□□□□ 0.33
TRIM47-205ENST00000587774 PFDN4Q9NQP4 134 aa17.13■□□□□ 0.33
TRIM47-205ENST00000587774 PRODH2Q9UF12 536 aa17.13■□□□□ 0.33
TRIM47-205ENST00000587774 MAPRE3Q9UPY8 281 aa17.13■□□□□ 0.33
TRIM47-205ENST00000587774 DLGAP4Q9Y2H0 992 aa17.13■□□□□ 0.33
TRIM47-205ENST00000587774 GNG14A0A1W2PPG7 69 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 FRG2CA6NGY1 282 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 ICOSLGO75144 302 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 ULK1O75385 1050 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 NME6O75414 186 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-205ENST00000587774 RHOXF2BP0C7M4 288 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 IMPDH1P20839 514 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 PPICP45877 212 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 NAGLUP54802 743 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 DCAF7P61962 342 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 HMGCS1Q01581 520 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 LCP2Q13094 533 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 NSUN5P2Q63ZY6 315 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 SLC30A6Q6NXT4 461 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 TRMT10CQ7L0Y3 403 aaKnown RBP17.12■□□□□ 0.33
TRIM47-205ENST00000587774 OR9A2Q8NGT5 310 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 METTL6Q8TCB7 284 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 EXOSC8Q96B26 276 aaKnown RBP17.12■□□□□ 0.33
TRIM47-205ENST00000587774 L3HYPDHQ96EM0 354 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 APIPQ96GX9 242 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 WDYHV1Q96HA8 205 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 KCNA7Q96RP8 456 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 TRIB1Q96RU8 372 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 EBPLQ9BY08 206 aa17.12■□□□□ 0.33
TRIM47-205ENST00000587774 PRAMEF25A6NGN4 478 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 TO15178 435 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 CTAG2O75638 210 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 IL2RAP01589 272 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 DRD2P14416 443 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 DRD5P21918 477 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 TIA1P31483 386 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 DNAJA1P31689 397 aaKnown RBP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 KIR2DL3P43628 341 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 PRKAA2P54646 552 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 ACSM2AQ08AH3 577 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 SNTA1Q13424 505 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 FBXL19-AS1Q494R0 122 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 SPIN4Q56A73 249 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 ACSM2BQ68CK6 577 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 SLC22A9Q8IVM8 553 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 CCDC116Q8IYX3 515 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 GBP7Q8N8V2 638 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 MZB1Q8WU39 189 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 KAT2AQ92830 837 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 ABTB1Q969K4 478 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 TMBIM1Q969X1 311 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 BTBD9Q96Q07 612 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 GSTO2Q9H4Y5 243 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 SERHLQ9NQF3 203 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 DNAJB12Q9NXW2 375 aaKnown RBP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 CRIM1Q9NZV1 1036 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 PSMC3IPQ9P2W1 217 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 ZNF629Q9UEG4 869 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 STK38LQ9Y2H1 464 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 GPR55Q9Y2T6 319 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 TIMM22Q9Y584 194 aa17.11■□□□□ 0.33
TRIM47-205ENST00000587774 NUP214P35658 2090 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-205ENST00000587774 MBD3L4A6NDZ8 208 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 MBD3L3A6NE82 208 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 OR6C70A6NIJ9 312 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 MBD3L5A6NJ08 208 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 CD8B2A6NJW9 211 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 SYT5O00445 386 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 ENO1P06733 434 aaKnown RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 FAM153BP0C7A2 387 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 CT45A8P0DMV1 189 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 CT45A9P0DMV2 189 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 ART1P52961 327 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 PKNOX1P55347 436 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 CORO7P57737 925 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 FAM153CQ494X1 144 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 CT45A2Q5DJT8 189 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 IFT20Q8IY31 132 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 WDSUB1Q8N9V3 476 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 MBD3L2Q8NHZ7 208 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 C16orf78Q8WTQ4 265 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 RNASE6Q93091 150 aaKnown RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 C11orf24Q96F05 449 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 COL21A1Q96P44 957 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 GPATCH1Q9BRR8 931 aaKnown RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 EPB41L4BQ9H329 900 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 FETUBQ9UGM5 382 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 TBK1Q9UHD2 729 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 EXO1Q9UQ84 846 aaKnown RBP17.1■□□□□ 0.33
TRIM47-205ENST00000587774 ACANP16112 2415 aa17.1■□□□□ 0.33
TRIM47-205ENST00000587774 ACTL6AO96019 429 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 GSTA1P08263 222 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 PYGBP11216 843 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 FOXA1P55317 472 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 RIPPLY3P57055 190 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 SLC29A2Q14542 456 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 HEPACAMQ14CZ8 416 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 SF3B4Q15427 424 aaKnown RBP eCLIP17.09■□□□□ 0.332e-9■■■■■ 35
TRIM47-205ENST00000587774 CEBPEQ15744 281 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 FLYWCH1Q4VC44 716 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms