RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PSD3Q9NYI0 1048 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 MAT2BQ9NZL9 334 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 ZNF180Q9UJW8 692 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 WIF1Q9Y5W5 379 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 PRR14LQ5THK1 2151 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 DSCAMO60469 2012 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 A0A096LPK6 155 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 EXOC1LA0A1B0GW35 172 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 SYCE1LA8MT33 242 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 SNPHO15079 494 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 SIAH2O43255 324 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 ERAL1O75616 437 aaKnown RBP10.56□□□□□ -0.72
LIG3-207ENST00000586119 KLHL2O95198 593 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 RCBTB2O95199 551 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 CLDN9O95484 217 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 CBX7O95931 251 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 INHBAP08476 426 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 INHBBP09529 407 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 NUDT17P0C025 328 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 CYP4B1P13584 511 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 PORP16435 677 aaPredicted RBP10.56□□□□□ -0.72
LIG3-207ENST00000586119 TSPAN8P19075 237 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 ARL1P40616 181 aaPredicted RBP10.56□□□□□ -0.72
LIG3-207ENST00000586119 NRG3P56975 720 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 NKX6-1P78426 367 aaPredicted RBP10.56□□□□□ -0.72
LIG3-207ENST00000586119 FAM27E3Q08E93 113 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 ACAP2Q15057 778 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 RASA2Q15283 850 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 CCNYL2Q5T2Q4 361 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 OR5M10Q6IEU7 315 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 NUP54Q7Z3B4 507 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 CCDC91Q7Z6B0 441 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 CXorf67Q86X51 503 aaPredicted RBP10.56□□□□□ -0.72
LIG3-207ENST00000586119 PTGR2Q8N8N7 351 aaPredicted RBP10.56□□□□□ -0.72
LIG3-207ENST00000586119 OR52R1Q8NGF1 315 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 ZPLD1Q8TCW7 415 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 ATP6V1E2Q96A05 226 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 TM4SF18Q96CE8 201 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 REPS1Q96D71 796 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 C18orf12Q96KH6 178 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 SECISBP2Q96T21 854 aaKnown RBP10.56□□□□□ -0.72
LIG3-207ENST00000586119 SERPINI1Q99574 410 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 C6orf203Q9P0P8 240 aaPredicted RBP10.56□□□□□ -0.72
LIG3-207ENST00000586119 ZNF639Q9UID6 485 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 FBXL2Q9UKC9 423 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 PLLPQ9Y342 182 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 PCDHA9Q9Y5H5 950 aa10.56□□□□□ -0.72
LIG3-207ENST00000586119 A0A087X1B8 175 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 SH3D21A4FU49 640 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 H0Y3Z8 333 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 UGDHO60701 494 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 LY6G6DO95868 133 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 TGM6O95932 706 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 IL18BPO95998 194 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 ALDOAP04075 364 aaKnown RBP10.55□□□□□ -0.72
LIG3-207ENST00000586119 CPN1P15169 458 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 PCSK2P16519 638 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 KRT15P19012 456 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 ADSLP30566 484 aaPredicted RBP10.55□□□□□ -0.72
LIG3-207ENST00000586119 HSD17B3P37058 310 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 EMDP50402 254 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 PHEXP78562 749 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 MRPS35P82673 323 aaKnown RBP10.55□□□□□ -0.72
LIG3-207ENST00000586119 SORDQ00796 357 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 MAP4K2Q12851 820 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 TRAF3Q13114 568 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 RCAN2Q14206 197 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 UAP1Q16222 522 aaPredicted RBP10.55□□□□□ -0.72
LIG3-207ENST00000586119 FAM83EQ2M2I3 478 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 TECRLQ5HYJ1 363 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 CLEC9AQ6UXN8 241 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 ADGRE4PQ86SQ3 457 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 BIVMQ86UB2 503 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 METTL4Q8N3J2 472 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 OR7G1Q8NGA0 311 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 OR4F6Q8NGB9 312 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 OR14L1PQ8NHC6 308 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 CTHRC1Q96CG8 243 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 LCORQ96JN0 433 aaPredicted RBP10.55□□□□□ -0.72
LIG3-207ENST00000586119 HBEGFQ99075 208 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 PAFAH2Q99487 392 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 OSBPL11Q9BXB4 747 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 VPS11Q9H270 941 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 NEUROD4Q9HD90 331 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 ARGLU1Q9NWB6 273 aaPredicted RBP10.55□□□□□ -0.72
LIG3-207ENST00000586119 EDARQ9UNE0 448 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 EXO1Q9UQ84 846 aaKnown RBP10.55□□□□□ -0.72
LIG3-207ENST00000586119 RTTNQ86VV8 2226 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 ROS1P08922 2347 aa10.55□□□□□ -0.72
LIG3-207ENST00000586119 A8MXE2 369 aa10.54□□□□□ -0.72
LIG3-207ENST00000586119 ERN1O75460 977 aaKnown RBP10.54□□□□□ -0.72
LIG3-207ENST00000586119 SEMA3DO95025 777 aa10.54□□□□□ -0.72
LIG3-207ENST00000586119 ACTL6AO96019 429 aa10.54□□□□□ -0.72
LIG3-207ENST00000586119 PDYNP01213 254 aa10.54□□□□□ -0.72
LIG3-207ENST00000586119 CHN1P15882 459 aa10.54□□□□□ -0.72
LIG3-207ENST00000586119 TYK2P29597 1187 aa10.54□□□□□ -0.72
LIG3-207ENST00000586119 CPA2P48052 419 aa10.54□□□□□ -0.72
LIG3-207ENST00000586119 TMED10P49755 219 aaKnown RBP10.54□□□□□ -0.72
LIG3-207ENST00000586119 LHX2P50458 406 aa10.54□□□□□ -0.72
LIG3-207ENST00000586119 CCNG1P51959 295 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms