RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 GXYLT1Q4G148 440 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 SH2D4BQ5SQS7 431 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 TMEM211Q6ICI0 200 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 RNF165Q6ZSG1 346 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 SLC34A3Q8N130 599 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 OR7G2Q8NG99 324 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 PPP1R14CQ8TAE6 165 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 TWIST2Q8WVJ9 160 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 GFM2Q969S9 779 aaKnown RBP18.73■□□□□ 0.59
SS18-224ENST00000584083 PNPLA3Q9NST1 481 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 TNFRSF10DQ9UBN6 386 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 ACAD8Q9UKU7 415 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 EXO1Q9UQ84 846 aaKnown RBP18.73■□□□□ 0.59
SS18-224ENST00000584083 GPR55Q9Y2T6 319 aaPredicted RBP18.73■□□□□ 0.59
SS18-224ENST00000584083 CENPEQ02224 2701 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 CRYBG3Q68DQ2 2970 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 CACNA1CQ13936 2221 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 HCN1O60741 890 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 ERN1O75460 977 aaKnown RBP18.72■□□□□ 0.59
SS18-224ENST00000584083 REM1O75628 298 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 HTR1EP28566 365 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 SERPINB5P36952 375 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 RPL38P63173 70 aaKnown RBP18.72■□□□□ 0.59
SS18-224ENST00000584083 RFTN2Q52LD8 501 aaPredicted RBP18.72■□□□□ 0.59
SS18-224ENST00000584083 EMC4Q5J8M3 183 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 CEP85LQ5SZL2 805 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 DESI1Q6ICB0 168 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 ZNF585AQ6P3V2 769 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 NUDCD3Q8IVD9 361 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 LIX1Q8N485 282 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 SARAFQ96BY9 339 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 ZBTB9Q96C00 473 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 CCT7Q99832 543 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 STMN4Q9H169 189 aaPredicted RBP18.72■□□□□ 0.59
SS18-224ENST00000584083 FOLH1BQ9HBA9 442 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 QPCTLQ9NXS2 382 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 TAS2R9Q9NYW1 312 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 COQ3Q9NZJ6 369 aa18.72■□□□□ 0.59
SS18-224ENST00000584083 UNC79Q9P2D8 2635 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 PIP5K1BO14986 540 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 LSM1O15116 133 aaKnown RBP18.71■□□□□ 0.59
SS18-224ENST00000584083 TO15178 435 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 AKAP10O43572 662 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 TRAPPC6AO75865 159 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 GRNP28799 593 aaKnown RBP18.71■□□□□ 0.59
SS18-224ENST00000584083 KRT20P35900 424 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 MC3RP41968 323 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 TRPC1P48995 793 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 CORO7P57737 925 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 TOMM20Q15388 145 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 UGT3A2Q3SY77 523 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 WLSQ5T9L3 541 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 TMEM107Q6UX40 140 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 TMBIM1Q969X1 311 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 SDCCAG3Q96C92 435 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 VSTM2LQ96N03 204 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 AMDHD1Q96NU7 426 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 TSSK3Q96PN8 268 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 BTBD9Q96Q07 612 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 NODALQ96S42 347 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 SLC6A15Q9H2J7 730 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 GLIPR2Q9H4G4 154 aa18.71■□□□□ 0.59
SS18-224ENST00000584083 A0A087WV62 115 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 WDR91A4D1P6 747 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 FIGNL2A6NMB9 653 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 COQ9O75208 318 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 UGT2B11O75310 529 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 SLITRK5O94991 958 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 CLDN14O95500 239 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 CT45A8P0DMV1 189 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 CT45A9P0DMV2 189 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 SDC1P18827 310 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 ETV4P43268 484 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 SERPINB4P48594 390 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 ZNF155Q12901 538 aaPredicted RBP18.7■□□□□ 0.58
SS18-224ENST00000584083 ZNF630Q2M218 657 aaPredicted RBP18.7■□□□□ 0.58
SS18-224ENST00000584083 CT45A2Q5DJT8 189 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 ANKRD26P1Q6NSI1 321 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 EXOC3L1Q86VI1 746 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 SLC44A2Q8IWA5 706 aaPredicted RBP18.7■□□□□ 0.58
SS18-224ENST00000584083 CLHC1Q8NHS4 586 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 HGDQ93099 445 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 PPCDCQ96CD2 204 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 PKNOX2Q96KN3 472 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 FCRL1Q96LA6 429 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 COL21A1Q96P44 957 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 GNRHR2Q96P88 292 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 ZIM3Q96PE6 472 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 REEP4Q9H6H4 257 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 ACKR4Q9NPB9 350 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 CHST11Q9NPF2 352 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 DDX18Q9NVP1 670 aaKnown RBP18.7■□□□□ 0.58
SS18-224ENST00000584083 ALKBH4Q9NXW9 302 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 KLRF1Q9NZS2 232 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 SPRR3Q9UBC9 169 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 BAIAP2L1Q9UHR4 511 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 TMED5Q9Y3A6 229 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 OR10H1Q9Y4A9 318 aa18.7■□□□□ 0.58
SS18-224ENST00000584083 OR6C70A6NIJ9 312 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 GNB5O14775 395 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms