RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 FRG2BQ96QU4 278 aa10.98□□□□□ -0.65
CDK5RAP3-231ENST00000584063 KXD1Q9BQD3 176 aa10.98□□□□□ -0.65
CDK5RAP3-231ENST00000584063 BEX2Q9BXY8 128 aa10.98□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ITPAQ9BY32 194 aa10.98□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SPATA6Q9NWH7 488 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-231ENST00000584063 IL19Q9UHD0 177 aa10.98□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PCM1Q15154 2024 aa10.98□□□□□ -0.65
CDK5RAP3-231ENST00000584063 GABRR3A8MPY1 467 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 A8MXE2 369 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TERTO14746 1132 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 HOXB3P14651 431 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ACVR2AP27037 513 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PIK3CBP42338 1070 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SPINT3P49223 89 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 P2RY4P51582 365 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ST3GAL4Q11206 333 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 NAE1Q13564 534 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TAB1Q15750 504 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 DUOXA1Q1HG43 343 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 HFEQ30201 348 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TTLL9Q3SXZ7 439 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ZMAT1Q5H9K5 638 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ARMCX4Q5H9R4 360 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 LRIF1Q5T3J3 769 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 UBTD2Q8WUN7 234 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 NINJ1Q92982 152 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RIOK2Q9BVS4 552 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OR51B6Q9H340 312 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 DEC1Q9P2X7 70 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ARHGEF33A8MVX0 844 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TNFRSF11BO00300 401 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 UPK1BO75841 260 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 APOL3O95236 402 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SOX14O95416 240 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SLC6A12P48065 614 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RIDAP52758 137 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PCDH1Q08174 1060 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CLN3Q13286 438 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ALKBH1Q13686 389 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RFX4Q33E94 735 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 HES5Q5TA89 166 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TSEN54Q7Z6J9 526 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 MEX3DQ86XN8 651 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 METTL4Q8N3J2 472 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ZNF675Q8TD23 568 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 LIPHQ8WWY8 451 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 NANOS1Q8WY41 292 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SMARCD2Q92925 531 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SLC38A4Q969I6 547 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OR4K3Q96R72 315 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 C1QTNF7Q9BXJ2 289 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 FBXO8Q9NRD0 319 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 MS4A12Q9NXJ0 267 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ANKMY1Q9P2S6 941 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OSGIN1Q9UJX0 560 aa10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PCDHGA9Q9Y5G4 932 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PLXNB3Q9ULL4 1909 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 AGAP14A8MT82 685 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 H7C1Q1 480 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TOR1AO14656 332 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SUV39H1O43463 412 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 MFN2O95140 757 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 JUNDP17535 347 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CTSKP43235 329 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 MAGEA2P43356 314 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SKP1P63208 163 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 GLO1Q04760 184 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ACSM2AQ08AH3 577 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 GRIN2CQ14957 1233 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 EXOC3L2Q2M3D2 409 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 GPR33Q49SQ1 333 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RSBN1Q5VWQ0 802 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ACSM2BQ68CK6 577 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OLIG3Q7RTU3 272 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PRSS48Q7RTY5 328 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 DMRTC2Q8IXT2 367 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CYP4Z2PQ8N1L4 340 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 LMLNQ96KR4 655 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 NEDD4LQ96PU5 975 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RPP25Q9BUL9 199 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SLC12A9Q9BXP2 914 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 GON7Q9BXV9 100 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OR51B5Q9H339 312 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TP63Q9H3D4 680 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 MAGIXQ9H6Y5 334 aa10.96□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PRAMEF25A6NGN4 478 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TPST2O60704 377 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GCM2O75603 506 aaPredicted RBP10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TP53P04637 393 aaPredicted RBP10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CTSLP07711 333 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OR56A5P0C7T3 313 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ATP1B2P14415 290 aaPredicted RBP10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PTGER1P34995 402 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PRIM2P49643 509 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ELP6Q0PNE2 266 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DBPQ10586 325 aaPredicted RBP10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TSTQ16762 297 aaKnown RBP10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DUSP6Q16828 381 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NXNL2Q5VZ03 156 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms