RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	CAMKMT	Q7Z624	323 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	TRIM42	Q8IWZ5	723 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	C1orf52	Q8N6N3	182 aa	Known RBP	13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	WFDC11	Q8NEX6	87 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZPLD1	Q8TCW7	415 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	TMBIM1	Q969X1	311 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	INTS12	Q96CB8	462 aa	Known RBP	13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	TM4SF18	Q96CE8	201 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	NTNG2	Q96CW9	530 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	MBD6	Q96DN6	1003 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	LRRC1	Q9BTT6	524 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	OR2B2	Q9GZK3	357 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	DLL4	Q9NR61	685 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	JKAMP	Q9P055	326 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF639	Q9UID6	485 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF780B	Q9Y6R6	833 aa		13.77	□□□□□ -0.21
SREBF1-222	ENST00000583732	POC1B-GALNT4	F8VUJ3	575 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	ACOX3	O15254	700 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	REM1	O75628	298 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	OR4F21	O95013	312 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	IL18BP	O95998	194 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	DRD2	P14416	443 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	CPOX	P36551	454 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	MAGEA12	P43365	314 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	TSNAXIP1	Q2TAA8	658 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	TEX35	Q5T0J7	233 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	TMEM81	Q6P7N7	255 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	ENPP6	Q6UWR7	440 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732		Q71RC1	249 aa	Predicted RBP	13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	IFNE	Q86WN2	208 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	WDSUB1	Q8N9V3	476 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	UHMK1	Q8TAS1	419 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	TRPC4AP	Q8TEL6	797 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF483	Q8TF39	744 aa	Predicted RBP	13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	CNRIP1	Q96F85	164 aa	Predicted RBP	13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	PAFAH2	Q99487	392 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	FAIM2	Q9BWQ8	316 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	PLEKHF2	Q9H8W4	249 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	HEY2	Q9UBP5	337 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	PRODH2	Q9UF12	536 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	FETUB	Q9UGM5	382 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	DKKL1	Q9UK85	242 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	UTS2R	Q9UKP6	389 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	PSME2	Q9UL46	239 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	SNX6	Q9UNH7	406 aa		13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	EXO1	Q9UQ84	846 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-222	ENST00000583732	MED12L	Q86YW9	2145 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	FRG2C	A6NGY1	282 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732		A8MT66	165 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	CBR3	O75828	277 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	OTC	P00480	354 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	HRG	P04196	525 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	CPN1	P15169	458 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	EMD	P50402	254 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	DCAF7	P61962	342 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	C10orf62	Q5T681	223 aa	Predicted RBP	13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	OR5M10	Q6IEU7	315 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	TAOK1	Q7L7X3	1001 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	PLCZ1	Q86YW0	608 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	CCDC116	Q8IYX3	515 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	KAT2A	Q92830	837 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	ISL2	Q96A47	359 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	EXOSC8	Q96B26	276 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	TMCO6	Q96DC7	493 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF681	Q96N22	645 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	SFXN2	Q96NB2	322 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	COL21A1	Q96P44	957 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	ADO	Q96SZ5	270 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	TM9SF2	Q99805	663 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	SMR3A	Q99954	134 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	SFXN3	Q9BWM7	321 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	MRPL46	Q9H2W6	279 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	TAS2R10	Q9NYW0	307 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	TRPS1	Q9UHF7	1281 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	FBXL2	Q9UKC9	423 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732	ABCA4	P78363	2273 aa		13.75	□□□□□ -0.21
SREBF1-222	ENST00000583732		A0A1W2PPR1	153 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	SH3D21	A4FU49	640 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	C17orf51	A8MQB3	221 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	TRIM49D1	C9J1S8	452 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	PLOD2	O00469	737 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	RCBTB2	O95199	551 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	IL3	P08700	152 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	CHN1	P15882	459 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	DRD5	P21918	477 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	IL12B	P29460	328 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	PPIC	P45877	212 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	SERPINB9	P50453	376 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	LHX2	P50458	406 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	GFRA1	P56159	465 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	CORO7	P57737	925 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	ETF1	P62495	437 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	HMGCS1	Q01581	520 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	CKAP4	Q07065	602 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	SNTA1	Q13424	505 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF628	Q5EBL2	1059 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms