RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SLC24A3Q9HC58 644 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 ANKHQ9HCJ1 492 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 RASSF1Q9NS23 344 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 PAK1IP1Q9NWT1 392 aaPredicted RBP21.23■□□□□ 0.99
CCDC47-204ENST00000582252 IMPAD1Q9NX62 359 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 KLHL28Q9NXS3 571 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 CDC14AQ9UNH5 594 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 RNF6Q9Y252 685 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 DSPPQ9NZW4 1301 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 RGS10O43665 173 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 MPZL2O60487 215 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 ST6GAL1P15907 406 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 IFNA8P32881 189 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 MAZP56270 477 aaKnown RBP21.22■□□□□ 0.99
CCDC47-204ENST00000582252 RAB38P57729 211 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 CDC42P60953 191 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 HNRNPKP61978 463 aaKnown RBP eCLIP21.22■□□□□ 0.99
CCDC47-204ENST00000582252 OLR1P78380 273 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 NPTX1Q15818 432 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 ZNF311Q5JNZ3 666 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 CA13Q8N1Q1 262 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 ARL14Q8N4G2 192 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 PRRC1Q96M27 445 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 SLC38A1Q9H2H9 487 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 PLCXD1Q9NUJ7 323 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 CLCA2Q9UQC9 943 aa21.22■□□□□ 0.99
CCDC47-204ENST00000582252 MRPS2Q9Y399 296 aaKnown RBP21.22■□□□□ 0.99
CCDC47-204ENST00000582252 ZNF318Q5VUA4 2279 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 A0A087WV62 115 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 TRBV4-1A0A0J9YWV2 114 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 A0A1W2PRQ8 180 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ZNF860A6NHJ4 632 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 PCDHGA12O60330 932 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 SRPX2O60687 465 aaPredicted RBP21.21■□□□□ 0.99
CCDC47-204ENST00000582252 GPR75O95800 540 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ATP1B1P05026 303 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 DGCR6Q14129 220 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 NDUFA9Q16795 377 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ZNF770Q6IQ21 691 aaPredicted RBP21.21■□□□□ 0.99
CCDC47-204ENST00000582252 HEPHL1Q6MZM0 1159 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 CCDC71Q8IV32 467 aaPredicted RBP21.21■□□□□ 0.99
CCDC47-204ENST00000582252 OR4D11Q8NGI4 311 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 RAB2BQ8WUD1 216 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 SGCDQ92629 289 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 SLC38A3Q99624 504 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 UCK2Q9BZX2 261 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 LHPPQ9H008 270 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 TIMMDC1Q9NPL8 285 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 A4GNTQ9UNA3 340 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 IFT52Q9Y366 437 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ZNF99A8MXY4 864 aaPredicted RBP21.21■□□□□ 0.99
CCDC47-204ENST00000582252 M0R3H8 397 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 OR10H3O60404 316 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 GASTP01350 101 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 PROS1P07225 676 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 SP9P0CG40 484 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 PCMT1P22061 227 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 KRT20P35900 424 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 CAPZBP47756 277 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 PPP1CAP62136 330 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 SHC2P98077 582 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ANGPT1Q15389 498 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ZNF628Q5EBL2 1059 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 C6orf132Q5T0Z8 1188 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 MLIPQ5VWP3 458 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 GTF2IRD2BQ6EKJ0 949 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ZCCHC12Q6PEW1 402 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 FAM111BQ6SJ93 734 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 PRSS48Q7RTY5 328 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 GTF2IRD2Q86UP8 949 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ZBTB44Q8NCP5 570 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 TCTN2Q96GX1 697 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 ERVMER34-1Q9H9K5 563 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 IL21RQ9HBE5 538 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 PILRBQ9UKJ0 227 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 KCNE3Q9Y6H6 103 aa21.21■□□□□ 0.99
CCDC47-204ENST00000582252 CYR61O00622 381 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 WBP4O75554 376 aaKnown RBP21.2■□□□□ 0.98
CCDC47-204ENST00000582252 POU2F1P14859 743 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 PCSK6P29122 969 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 PRKAR1BP31321 381 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 IDH2P48735 452 aaKnown RBP21.2■□□□□ 0.98
CCDC47-204ENST00000582252 CRISP1P54107 249 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 SNRPNP63162 240 aaKnown RBP21.2■□□□□ 0.98
CCDC47-204ENST00000582252 DHRS4L2Q6PKH6 230 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 KLHL17Q6TDP4 642 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 RBM45Q8IUH3 476 aaKnown RBP21.2■□□□□ 0.98
CCDC47-204ENST00000582252 LACC1Q8IV20 430 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 OR4N5Q8IXE1 308 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 RHOXF1Q8NHV9 184 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 RORBQ92753 470 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 FKBP10Q96AY3 582 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 DGCR6LQ9BY27 220 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 ERVK-18Q9QC07 812 aa21.2■□□□□ 0.98
CCDC47-204ENST00000582252 C19orf53Q9UNZ5 99 aaPredicted RBP21.2■□□□□ 0.98
CCDC47-204ENST00000582252 A0A1B0GVT2 93 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 BLACEA4D250 179 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 H3BMQ9 156 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 OSMP13725 252 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 NT5EP21589 574 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms