RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 MPIP34949 423 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 GCKP35557 465 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 FEN1P39748 380 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 MASP1P48740 699 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 ASCL1P50553 236 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 KRTAP10-9P60411 292 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 SORDQ00796 357 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 ACSM2AQ08AH3 577 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 EFR3AQ14156 821 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 ACSM2BQ68CK6 577 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 POMZP3Q6PJE2 187 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 ARSKQ6UWY0 536 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 RNF165Q6ZSG1 346 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 TRIM46Q7Z4K8 759 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 ADGRE4PQ86SQ3 457 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 TDRPQ86YL5 185 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 LIX1LQ8IVB5 337 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 CDYL2Q8N8U2 506 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 OR1J4Q8NGS1 313 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 RDH11Q8TC12 318 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 RNASE6Q93091 150 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 TMCO6Q96DC7 493 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 OMA1Q96E52 524 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 VSTM2LQ96N03 204 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 GNRHR2Q96P88 292 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 ACPTQ9BZG2 426 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 OR2B2Q9GZK3 357 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 METTL7AQ9H8H3 244 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 GIMAP4Q9NUV9 329 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 EDARQ9UNE0 448 aa13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 PRRC2AP48634 2157 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-216ENST00000580419 C15orf38-AP3S2A0A0A6YYH1 394 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 TTC36A6NLP5 189 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 PCDH7O60245 1069 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 ICOSLGO75144 302 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 CTAG2O75638 210 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 IL2RAP01589 272 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 HMOX2P30519 316 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 TIA1P31483 386 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 PTGDSP41222 190 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 PNLIPRP2P54317 469 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 DLX5P56178 289 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 RIPPLY3P57055 190 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 DNAJB13P59910 316 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 RAE1P78406 368 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 PLCXD2Q0VAA5 305 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 SGO1Q5FBB7 561 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 FAM111BQ6SJ93 734 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 SH2D5Q6ZV89 423 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 FAM222BQ8WU58 562 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 WDYHV1Q96HA8 205 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 JSRP1Q96MG2 331 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 COL21A1Q96P44 957 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 SH3GL2Q99962 352 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 OSBPL11Q9BXB4 747 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 ITPAQ9BY32 194 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 BRINP2Q9C0B6 783 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 HHATLQ9HCP6 504 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 SLC35C2Q9NQQ7 365 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 TAS2R9Q9NYW1 312 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 JKAMPQ9P055 326 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 BCAP29Q9UHQ4 241 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 DTX4Q9Y2E6 619 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 DLGAP4Q9Y2H0 992 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 PLLPQ9Y342 182 aa13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 HRNRQ86YZ3 2850 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-216ENST00000580419 PLOD2O00469 737 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 GLRA3O75311 464 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 CT45A8P0DMV1 189 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 CT45A9P0DMV2 189 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 BMP7P18075 431 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 DDCP20711 480 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 PRPH2P23942 346 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 CHMP24386 653 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 OPRM1P35372 400 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 SLC29A2Q14542 456 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 DAZAP2Q15038 168 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 BCL2A1Q16548 175 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 ERCC6LQ2NKX8 1250 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 CCDC153Q494R4 210 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 TRMT12Q53H54 448 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 ENPP6Q6UWR7 440 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 TMEM64Q6YI46 380 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 IKBIPQ70UQ0 350 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 KIF18BQ86Y91 864 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 OR52R1Q8NGF1 315 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 DOK4Q8TEW6 326 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 SREK1Q8WXA9 508 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 ABTB1Q969K4 478 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 UGT2B28Q9BY64 529 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 EPB41L4BQ9H329 900 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 ACBD3Q9H3P7 528 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 GSTO2Q9H4Y5 243 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 HEY2Q9UBP5 337 aa13.22□□□□□ -0.29
SMARCE1-216ENST00000580419 GNG14A0A1W2PPG7 69 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 PRAMEF25A6NGN4 478 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 MYO1GB0I1T2 1018 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms