RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 PTPN6P29350 595 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 DGKQP52824 942 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 DLX5P56178 289 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 LCP2Q13094 533 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 FBXL19-AS1Q494R0 122 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 EIPR1Q53HC9 387 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 SPDYAQ5MJ70 313 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 ZNF678Q5SXM1 525 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 RPS27LQ71UM5 84 aaKnown RBP12.52□□□□□ -0.41
GGA3-208ENST00000579743 CHMP1BQ7LBR1 199 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 IFNEQ86WN2 208 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 CCDC116Q8IYX3 515 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 NOA1Q8NC60 698 aaKnown RBP12.52□□□□□ -0.41
GGA3-208ENST00000579743 FAM83FQ8NEG4 500 aaPredicted RBP12.52□□□□□ -0.41
GGA3-208ENST00000579743 KIF18AQ8NI77 898 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 ZPLD1Q8TCW7 415 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 CTHRC1Q96CG8 243 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 BBS4Q96RK4 519 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 UGT2B28Q9BY64 529 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 CLEC4MQ9H2X3 399 aaPredicted RBP12.52□□□□□ -0.41
GGA3-208ENST00000579743 DCDC2Q9UHG0 476 aa12.52□□□□□ -0.41
GGA3-208ENST00000579743 ARHGAP21Q5T5U3 1957 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 MBD3L4A6NDZ8 208 aaPredicted RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 MBD3L3A6NE82 208 aaPredicted RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 MBD3L5A6NJ08 208 aaPredicted RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 EEF1E1-BLOC1S5C9J1V9 151 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 H0Y3Z8 333 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 PPP6CO00743 305 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 EEF1E1O43324 174 aaKnown RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 COQ9O75208 318 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 SLITRK5O94991 958 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 GOSR1O95249 250 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 IL3P08700 152 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 CPN1P15169 458 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 PCSK2P16519 638 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 CHMP24386 653 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 DNAJA1P31689 397 aaKnown RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 CLK3P49761 638 aaKnown RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 PRKAA2P54646 552 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 MGAT2Q10469 447 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 IMPG1Q17R60 797 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 TRMT12Q53H54 448 aaKnown RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 FNDC7Q5VTL7 733 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 YRDCQ86U90 279 aaKnown RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 FAM9CQ8IZT9 166 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 MBD3L2Q8NHZ7 208 aaPredicted RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 HGDQ93099 445 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 EXOSC8Q96B26 276 aaKnown RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 CNRIP1Q96F85 164 aaPredicted RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 HBEGFQ99075 208 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 EPB41L4BQ9H329 900 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 SERHLQ9NQF3 203 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 MIEF1Q9NQG6 463 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 SDHAF3Q9NRP4 125 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 TAS2R10Q9NYW0 307 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 EHD3Q9NZN3 535 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 TMEM216Q9P0N5 145 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 PSMC3IPQ9P2W1 217 aaPredicted RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 MRTO4Q9UKD2 239 aaKnown RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 MAPRE3Q9UPY8 281 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 DTX4Q9Y2E6 619 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 GPR55Q9Y2T6 319 aaPredicted RBP12.51□□□□□ -0.41
GGA3-208ENST00000579743 OR10H1Q9Y4A9 318 aa12.51□□□□□ -0.41
GGA3-208ENST00000579743 A6NNC1 897 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 DLX3O60479 287 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 UGT2B11O75310 529 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 CBX7O95931 251 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 ANXA4P09525 319 aaPredicted RBP12.5□□□□□ -0.41
GGA3-208ENST00000579743 TMIGD3P0DMS9 266 aaPredicted RBP12.5□□□□□ -0.41
GGA3-208ENST00000579743 SRD5A2P31213 254 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 EMDP50402 254 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 PNLIPRP2P54317 469 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 NAGLUP54802 743 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 DIO3P55073 304 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 MRPS35P82673 323 aaKnown RBP12.5□□□□□ -0.41
GGA3-208ENST00000579743 SORDQ00796 357 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 GAB1Q13480 694 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 ZNHIT3Q15649 155 aaPredicted RBP12.5□□□□□ -0.41
GGA3-208ENST00000579743 LTB4RQ15722 352 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 UNC50Q53HI1 259 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 UBAP2Q5T6F2 1119 aaKnown RBP12.5□□□□□ -0.41
GGA3-208ENST00000579743 SEM1Q6ZVN7 128 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 LARP4Q71RC2 724 aaKnown RBP eCLIP12.5□□□□□ -0.41
GGA3-208ENST00000579743 PLCZ1Q86YW0 608 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 HOMEZQ8IX15 550 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 CCNYL1Q8N7R7 359 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 RELL2Q8NC24 303 aaPredicted RBP12.5□□□□□ -0.41
GGA3-208ENST00000579743 TMBIM1Q969X1 311 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 L3HYPDHQ96EM0 354 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 ZNF681Q96N22 645 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 BTBD9Q96Q07 612 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 NODALQ96S42 347 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 FOXC2Q99958 501 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 GPATCH1Q9BRR8 931 aaKnown RBP12.5□□□□□ -0.41
GGA3-208ENST00000579743 SFXN3Q9BWM7 321 aa12.5□□□□□ -0.41
GGA3-208ENST00000579743 IQCGQ9H095 443 aaKnown RBP12.5□□□□□ -0.41
GGA3-208ENST00000579743 GALNT9Q9HCQ5 603 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms