RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 VMACQ2NL98 169 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 DEFB134Q4QY38 66 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 TCTE1Q5JU00 501 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 GCNT6Q5T4J0 391 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 OR52E8Q6IFG1 317 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 FRMPD2BQ6IN97 320 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 SLC48A1Q6P1K1 146 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 IZUMO2Q6UXV1 221 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 ZNF793Q6ZN11 406 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 MRGPREQ86SM8 312 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 MCATQ8IVS2 390 aaKnown RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 MCEMP1Q8IX19 187 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 DTWD1Q8N5C7 304 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 C11orf65Q8NCR3 313 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 PNPT1Q8TCS8 783 aaKnown RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 UTP15Q8TED0 518 aaKnown RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 TM9SF4Q92544 642 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 RNF145Q96MT1 663 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 TRAPPC9Q96Q05 1148 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 SEPHS2Q99611 448 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 PKP2Q99959 881 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 BDH2Q9BUT1 245 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 IKZF5Q9H5V7 419 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 RPF2Q9H7B2 306 aaKnown RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 ANKHQ9HCJ1 492 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 LYRM4Q9HD34 91 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 C8orf4Q9NR00 106 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 ADPRHL2Q9NX46 363 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 GMPR2Q9P2T1 348 aaKnown RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 PLCL2Q9UPR0 1127 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 ASB4Q9Y574 426 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 SLC22A7Q9Y694 548 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 HIVEP3Q5T1R4 2406 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 ITPR2Q14571 2701 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 LOC105369274A0A096LPK9 316 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 LOC102723532A0A0G2JNH3 316 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 A0A1W2PR48 441 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 TCRBV5S2A0A599 114 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 C5orf58C9J3I9 102 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 GNGT2O14610 69 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 PROM1O43490 865 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 DEAF1O75398 565 aaPredicted RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 TIPRLO75663 272 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 BMP10O95393 424 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 ZNF682O95780 498 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 AIFM1O95831 613 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 B3GALT4O96024 378 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 ST6GAL1P15907 406 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 ITGA3P26006 1051 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 PCGF2P35227 344 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 FOLR3P41439 243 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 TXNL4AP83876 142 aaKnown RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 PRR5P85299 388 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 TNFRSF17Q02223 184 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 HSPB3Q12988 150 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 GAB1Q13480 694 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 GNA13Q14344 377 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 LRRC36Q1X8D7 754 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 ZNF630Q2M218 657 aaPredicted RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 LRRC23Q53EV4 343 aaPredicted RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 DCAF10Q5QP82 559 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.49□□□□□ -0.89
SS18-207ENST00000577636 OGFRL1Q5TC84 451 aaPredicted RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 MRM1Q6IN84 353 aaKnown RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 SZRD1Q7Z422 152 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 FJX1Q86VR8 437 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 GPR135Q8IZ08 494 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 ADGRG5Q8IZF4 528 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 OR4N4Q8N0Y3 316 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 TTC29Q8NA56 475 aaPredicted RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 ST6GALNAC3Q8NDV1 305 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 OR56A1Q8NGH5 318 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 FBXO30Q8TB52 745 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 ADAMTS18Q8TE60 1221 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 NRG4Q8WWG1 115 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 LRTOMTQ8WZ04 291 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 SDCCAG3Q96C92 435 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 SLC47A1Q96FL8 570 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 DPH2Q9BQC3 489 aaPredicted RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 NPLQ9BXD5 320 aaPredicted RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 MAGIXQ9H6Y5 334 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 C3orf14Q9HBI5 128 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 DCAF13Q9NV06 445 aaKnown RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 OLAHQ9NV23 265 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 P4HTMQ9NXG6 502 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 IFT80Q9P2H3 777 aaPredicted RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 NDOR1Q9UHB4 597 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 RIMS3Q9UJD0 308 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 ANGPT4Q9Y264 503 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 MRPS33Q9Y291 106 aaKnown RBP9.49□□□□□ -0.89
SS18-207ENST00000577636 ATG4BQ9Y4P1 393 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 LRRC42Q9Y546 428 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 CSAG2Q9Y5P2 127 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 SPTBP11277 2137 aa9.49□□□□□ -0.89
SS18-207ENST00000577636 MDC1Q14676 2089 aaKnown RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 CELSR2Q9HCU4 2923 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 GLOD5A6NK44 160 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 P2RX6O15547 441 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 TPST1O60507 370 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms