RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GTPBP2Q9BX10 602 aaKnown RBP16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 LRRN3Q9H3W5 708 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 SRA1Q9HD15 236 aaKnown RBP16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 RNF186Q9NXI6 227 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 MBD2Q9UBB5 411 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 MGAT4CQ9UBM8 478 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 MAB21L2Q9Y586 359 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 SLC16A5O15375 505 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 S100A6P06703 90 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 FBXO45P0C2W1 286 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 JAGN1Q8N5M9 183 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 DUSP21Q9H596 190 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 MLXQ9UH92 298 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 CENPBD1B2RD01 187 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 WASH3PC4AMC7 463 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 KHNYNO15037 678 aaKnown RBP16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 FGF18O76093 207 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 CRYZL1O95825 349 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 DNASE1L1P49184 302 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 GPR19Q15760 415 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 TRIM46Q7Z4K8 759 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 BOLLQ8N9W6 283 aaKnown RBP16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 SYT14Q8NB59 555 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 OR56A1Q8NGH5 318 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 SPRYD4Q8WW59 207 aaPredicted RBP16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 C11orf54Q9H0W9 315 aaPredicted RBP16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 PCM1Q15154 2024 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 BTAF1O14981 1849 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 PLATP00750 562 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 H2AFB2P0C5Z0 115 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 NDUFV2P19404 249 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 SLC19A1P41440 591 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 VIPR2P41587 438 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 RIMKLAQ8IXN7 391 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 DYNC2LI1Q8TCX1 351 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 ASB12Q8WXK4 309 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 RDH14Q9HBH5 336 aa16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 USP36Q9P275 1121 aaKnown RBP16.95■□□□□ 0.3
ATPAF1-214ENST00000576409 TMEM202A6NGA9 273 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 OR52A4PA6NMU1 304 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 ECDO95905 644 aaPredicted RBP16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 GKN3PP0CG01 181 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 POLR2CP19387 275 aaPredicted RBP16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 HLA-FP30511 346 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 EVI2BP34910 448 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 ARFIP1P53367 373 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 CTBP2P56545 445 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 ILF3Q12906 894 aaKnown RBP eCLIP16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 SLC14A1Q13336 389 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 CTF1Q16619 201 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 XAF1Q6GPH4 301 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 RSPO2Q6UXX9 243 aaPredicted RBP16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 ZNF783Q6ZMS7 281 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 LINC00471Q8N535 108 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 EXO5Q9H790 373 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 TRBV2A0A0J9YWF9 115 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 C6P13671 934 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 RPL34P49207 117 aaKnown RBP16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 EIPR1Q53HC9 387 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 HES5Q5TA89 166 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 CHCHD4Q8N4Q1 142 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 ARSGQ96EG1 525 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 DUS3LQ96G46 650 aaKnown RBP16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 BCL2L14Q9BZR8 327 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 COMMD4Q9H0A8 199 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 DMRT3Q9NQL9 472 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 IGLON5A6NGN9 336 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 HMX3A6NHT5 357 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 SERPINA3P01011 423 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 GABRA3P34903 492 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 SELENBP1Q13228 472 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 SLC14A2Q15849 920 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 UBE2Q1Q7Z7E8 422 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 PLEKHA6Q9Y2H5 1048 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 SNX11Q9Y5W9 270 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 CDH10Q9Y6N8 788 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 CABIN1Q9Y6J0 2220 aa16.94■□□□□ 0.3
ATPAF1-214ENST00000576409 C13orf42A0A1B0GVH6 325 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 POM121CA8CG34 1229 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 RNASET2O00584 256 aaKnown RBP16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 RAD1O60671 282 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 RPS25P62851 125 aaKnown RBP16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 PIP5KL1Q5T9C9 394 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 MMP21Q8N119 569 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 METTL27Q8N6F8 245 aaPredicted RBP16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 OR5J2Q8NH18 312 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 FIBINQ8TAL6 211 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 SLC38A5Q8WUX1 472 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 HYLS1Q96M11 299 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 TMEM175Q9BSA9 504 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 FZD3Q9NPG1 666 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 NUP50Q9UKX7 468 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 MCM3APO60318 1980 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 ZNF432O94892 652 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 PSMA3P25788 255 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 EIF1AXP47813 144 aaKnown RBP16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 PRSS36Q5K4E3 855 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 CCNJQ5T5M9 372 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 METTL2BQ6P1Q9 378 aaKnown RBP16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 BTN2A1Q7KYR7 527 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms