RNA–Protein interactions for RNA: ENST00000574450.1

LCMT1-209, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-209ENST00000574450 SIMC1Q8NDZ2 872 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 OR4A15Q8NGL6 344 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 TMEM125Q96AQ2 219 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 PANX1Q96RD7 426 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 SECISBP2Q96T21 854 aaKnown RBP13.39□□□□□ -0.27
LCMT1-209ENST00000574450 ELAC2Q9BQ52 826 aaKnown RBP13.39□□□□□ -0.27
LCMT1-209ENST00000574450 LMF2Q9BU23 707 aaKnown RBP13.39□□□□□ -0.27
LCMT1-209ENST00000574450 ITPAQ9BY32 194 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.39□□□□□ -0.27
LCMT1-209ENST00000574450 NXF5Q9H1B4 397 aaKnown RBP13.39□□□□□ -0.27
LCMT1-209ENST00000574450 EPN3Q9H201 632 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 LIN28AQ9H9Z2 209 aaKnown RBP13.39□□□□□ -0.27
LCMT1-209ENST00000574450 HPF1Q9NWY4 346 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 PLA2G3Q9NZ20 509 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 CCDC167Q9P0B6 97 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 MRTO4Q9UKD2 239 aaKnown RBP13.39□□□□□ -0.27
LCMT1-209ENST00000574450 PCDHGB3Q9Y5G1 929 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 SNX8Q9Y5X2 465 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
LCMT1-209ENST00000574450 TNRC6AQ8NDV7 1962 aaKnown RBP13.38□□□□□ -0.27
LCMT1-209ENST00000574450 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 A0A1W2PP18 115 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 CCDC154A6NI56 674 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 DUXAA6NLW8 204 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 RFXANKO14593 260 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 TP53I11O14683 189 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 ABCB7O75027 752 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 NEURL1O76050 574 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 NADKO95544 446 aaPredicted RBP13.38□□□□□ -0.27
LCMT1-209ENST00000574450 HMGN2P05204 90 aaKnown RBP13.38□□□□□ -0.27
LCMT1-209ENST00000574450 SOX3P41225 446 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 PRKAG1P54619 331 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 MRPS22P82650 360 aaKnown RBP13.38□□□□□ -0.27
LCMT1-209ENST00000574450 PSG6Q00889 435 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 TP53BP2Q13625 1128 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 ZNF169Q14929 603 aaPredicted RBP13.38□□□□□ -0.27
LCMT1-209ENST00000574450 OR1C1Q15619 314 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 NTRK2Q16620 822 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 ZNF791Q3KP31 576 aaPredicted RBP13.38□□□□□ -0.27
LCMT1-209ENST00000574450 AGKQ53H12 422 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 MFSD12Q6NUT3 480 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 RTL4Q6ZR62 310 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 PIGWQ7Z7B1 504 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 CLECL1Q8IZS7 167 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 CYP4Z2PQ8N1L4 340 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 TMEM178AQ8NBL3 297 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 MDS2Q8NDY4 140 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 OR9I1Q8NGQ6 314 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 SPACA9Q96E40 222 aaPredicted RBP13.38□□□□□ -0.27
LCMT1-209ENST00000574450 SPDL1Q96EA4 605 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 GIMAP5Q96F15 307 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 MAGED4Q96JG8 741 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 PHF12Q96QT6 1004 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 STACQ99469 402 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 ACTRT3Q9BYD9 372 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 ANKRA2Q9H9E1 313 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 Q9N2J8 555 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 TIMMDC1Q9NPL8 285 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 SLC52A3Q9NQ40 469 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 SAR1AQ9NR31 198 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 DUSP22Q9NRW4 184 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 VPS4AQ9UN37 437 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 FAF1Q9UNN5 650 aaPredicted RBP13.38□□□□□ -0.27
LCMT1-209ENST00000574450 ERVK-11Q9UQG0 969 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 DTX4Q9Y2E6 619 aa13.38□□□□□ -0.27
LCMT1-209ENST00000574450 PRRC2CQ9Y520 2896 aaKnown RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 NUP214P35658 2090 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 SHOX2O60902 331 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 OR6B1O95007 311 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 NKX2-2O95096 273 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 CPSF4O95639 269 aaKnown RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 SP1P08047 785 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 ABCB1P08183 1280 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 EFNA1P20827 205 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 ABCD3P28288 659 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 CD97P48960 835 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 PNLIPRP2P54317 469 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 PSMD4P55036 377 aaKnown RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 RPP38P78345 283 aaKnown RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 ZNF155Q12901 538 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 INAQ16352 499 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 TIGD2Q4W5G0 525 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 EXOSC6Q5RKV6 272 aaKnown RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 ZNF468Q5VIY5 522 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 SLC6A19Q695T7 634 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 SLC25A25Q6KCM7 469 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 LYPD8Q6UX82 237 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 IL20RBQ6UXL0 311 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 C16orf47Q6ZP98 133 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 NUP54Q7Z3B4 507 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 C6orf120Q7Z4R8 191 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 ANKRD46Q86W74 232 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 SLC34A3Q8N130 599 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 MIPOL1Q8TD10 442 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 GTF2H4Q92759 462 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 SCMH1Q96GD3 660 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 C5orf34Q96MH7 638 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 BBC3Q96PG8 261 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-209ENST00000574450 TRIM4Q9C037 500 aa13.37□□□□□ -0.27
LCMT1-209ENST00000574450 SERHLQ9NQF3 203 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms