RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 TRMT10CQ7L0Y3 403 aaKnown RBP19.28■□□□□ 0.68
CHRNB1-206ENST00000574054 CCDC116Q8IYX3 515 aa19.28■□□□□ 0.68
CHRNB1-206ENST00000574054 KAT2AQ92830 837 aa19.28■□□□□ 0.68
CHRNB1-206ENST00000574054 ANKRA2Q9H9E1 313 aa19.28■□□□□ 0.68
CHRNB1-206ENST00000574054 CRIM1Q9NZV1 1036 aa19.28■□□□□ 0.68
CHRNB1-206ENST00000574054 MED13LQ71F56 2210 aa19.28■□□□□ 0.68
CHRNB1-206ENST00000574054 MED12Q93074 2177 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 HRNRQ86YZ3 2850 aaPredicted RBP19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 FRG2CA6NGY1 282 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 RIPK2O43353 540 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 REM1O75628 298 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 CD1EP15812 388 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 IMPDH1P20839 514 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 DRD5P21918 477 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 NAGLUP54802 743 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 RIPPLY3P57055 190 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 LCP2Q13094 533 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 SNTA1Q13424 505 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 ERCC6LQ2NKX8 1250 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 SPIN4Q56A73 249 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 ZNF628Q5EBL2 1059 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 NHSL2Q5HYW2 709 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 LCA5Q86VQ0 697 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 SLC22A9Q8IVM8 553 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 IFT20Q8IY31 132 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 GBP7Q8N8V2 638 aaPredicted RBP19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 OR9A2Q8NGT5 310 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 RDH11Q8TC12 318 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 RNASE6Q93091 150 aaKnown RBP19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 TMBIM1Q969X1 311 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 NTNG2Q96CW9 530 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 WDYHV1Q96HA8 205 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 COL21A1Q96P44 957 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 GPATCH1Q9BRR8 931 aaKnown RBP19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 EBPLQ9BY08 206 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 POLDIP3Q9BY77 421 aaKnown RBP19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 GIMAP4Q9NUV9 329 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 STK38LQ9Y2H1 464 aa19.27■□□□□ 0.68
CHRNB1-206ENST00000574054 NME6O75414 186 aaPredicted RBP19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 CTAG2O75638 210 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 BCAS2O75934 225 aaPredicted RBP19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 ENO1P06733 434 aaKnown RBP19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 RHOXF2BP0C7M4 288 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 DRD2P14416 443 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 DNAJA1P31689 397 aaKnown RBP19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 PEX19P40855 299 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 PTGDSP41222 190 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 AGFG1P52594 562 aaKnown RBP19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 ZNF136P52737 540 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 PRKAA2P54646 552 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 PKNOX1P55347 436 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 RAE1P78406 368 aaKnown RBP19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 BTKQ06187 659 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 RCAN2Q14206 197 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 TMEM81Q6P7N7 255 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 SCIMPQ6UWF3 145 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 OR14L1PQ8NHC6 308 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 ZNF675Q8TD23 568 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 C16orf78Q8WTQ4 265 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 APIPQ96GX9 242 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 SH3GL2Q99962 352 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 EPB41L4BQ9H329 900 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 SENP1Q9P0U3 644 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 ZNF629Q9UEG4 869 aaPredicted RBP19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 GPR55Q9Y2T6 319 aaPredicted RBP19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 TIMM22Q9Y584 194 aa19.26■□□□□ 0.67
CHRNB1-206ENST00000574054 CCDC151A5D8V7 595 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 CD8B2A6NJW9 211 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 EEF1E1-BLOC1S5C9J1V9 151 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 TO15178 435 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 EEF1E1O43324 174 aaKnown RBP19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 ACTL6AO96019 429 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 PYGBP11216 843 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 CYP4B1P13584 511 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 TIA1P31483 386 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 KRT20P35900 424 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 CORO7P57737 925 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 HEPACAMQ14CZ8 416 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 SAMD14Q8IZD0 417 aaPredicted RBP19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 CCNYL1Q8N7R7 359 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 CDC26Q8NHZ8 85 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 TMCO6Q96DC7 493 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 L3HYPDHQ96EM0 354 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 BTBD9Q96Q07 612 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 KCNA7Q96RP8 456 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 PSMC3IPQ9P2W1 217 aaPredicted RBP19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 TBK1Q9UHD2 729 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 EXO1Q9UQ84 846 aaKnown RBP19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 NF1P21359 2839 aa19.25■□□□□ 0.67
CHRNB1-206ENST00000574054 OR6C70A6NIJ9 312 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 CBR3O75828 277 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 GSTA1P08263 222 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 IL12BP29460 328 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 SRYQ05066 204 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 FLYWCH1Q4VC44 716 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 SPDYAQ5MJ70 313 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 CEP112Q8N8E3 955 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 WDSUB1Q8N9V3 476 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 ACMSDQ8TDX5 336 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 ERP27Q96DN0 273 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms