RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 KCNAB2Q13303 367 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 DUSP5Q16690 384 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 ATG16L2Q8NAA4 619 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 RSPO3Q9BXY4 272 aaPredicted RBP27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 KCND3Q9UK17 655 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 ADAMTS20P59510 1910 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 RP1P56715 2156 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 A6NHS1 94 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 A8MVJ9 347 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 J3KTA2 159 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 PABPC4LP0CB38 370 aaKnown RBP27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 ITGAMP11215 1152 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 CHRNEQ04844 493 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 OLIG3Q7RTU3 272 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 WDR53Q7Z5U6 358 aaPredicted RBP27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 PIK3C3Q8NEB9 887 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 RIT1Q92963 219 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 RMND5BQ96G75 393 aaPredicted RBP27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 DGAT2Q96PD7 388 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 PELOQ9BRX2 385 aaKnown RBP27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 ACER3Q9NUN7 267 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 NDOR1Q9UHB4 597 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 GMEB2Q9UKD1 530 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 SATB2Q9UPW6 733 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 SYT5O00445 386 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 GADD45GO95257 159 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 CLIC3O95833 236 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 LGI1O95970 557 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 AK1P00568 194 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 SP9P0CG40 484 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 ALAS2P22557 587 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 SERTAD2Q14140 314 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 ERV3-1Q14264 604 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 CHDHQ8NE62 594 aaPredicted RBP27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 ZNF501Q96CX3 271 aaPredicted RBP27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR1F2PQ96R84 312 aa27.18■■□□□ 1.94
CTDNEP1-208ENST00000573600 ASXL3Q9C0F0 2248 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 H3BNH8 94 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 SLC16A6O15403 523 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 NME6O75414 186 aaPredicted RBP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 CDC123O75794 336 aaPredicted RBP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 SMNDC1O75940 238 aaKnown RBP eCLIP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 GALNSP34059 522 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 STT3AP46977 705 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 PDX1P52945 283 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 CCL7P80098 99 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 EXOSC7Q15024 291 aaKnown RBP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 MICAQ29983 383 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 ZNF311Q5JNZ3 666 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 MLIPQ5VWP3 458 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 TTC33Q6PID6 262 aaPredicted RBP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 OFCC1Q8IZS5 231 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR4D9Q8NGE8 314 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 ZNF578Q96N58 590 aaPredicted RBP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 LRRN3Q9H3W5 708 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 MTHFD2LQ9H903 347 aaPredicted RBP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 CACYBPQ9HB71 228 aaKnown RBP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 FGF21Q9NSA1 209 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 KRT84Q9NSB2 600 aa27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 ATXN7L1Q9ULK2 861 aaPredicted RBP27.17■■□□□ 1.94
CTDNEP1-208ENST00000573600 TGFBR3LH3BV60 316 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 DSCR3O14972 297 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 UGT2B11O75310 529 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 CBX7O95931 251 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 RPLP0P05388 317 aaKnown RBP27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 ANXA8P13928 327 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 MAP3K8P41279 467 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 LIMS1P48059 325 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 BTG2P78543 158 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 IL18R1Q13478 541 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 EXOC3L2Q2M3D2 409 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 COLEC12Q5KU26 742 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 ZNF574Q6ZN55 896 aaPredicted RBP27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 DGAT2L6Q6ZPD8 337 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 C7orf57Q8NEG2 295 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 VANGL1Q8TAA9 524 aaPredicted RBP27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 DOK4Q8TEW6 326 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 MUS81Q96NY9 551 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 PSD2Q9BQI7 771 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 IFT52Q9Y366 437 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 MMACHCQ9Y4U1 282 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 CLDN16Q9Y5I7 305 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 MAU2Q9Y6X3 613 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 LOC100130705A0A1B0GUX0 176 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 A0A1W2PQM1 296 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 RPS6KA3P51812 740 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 ACY1Q03154 408 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 TCTN3Q6NUS6 607 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 FRRS1Q6ZNA5 592 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 ARHGAP22Q7Z5H3 698 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 APLFQ8IW19 511 aaPredicted RBP27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 C8orf59Q8N0T1 100 aaPredicted RBP27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR10G2Q8NGC3 310 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR52R1Q8NGF1 315 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 PHF10Q8WUB8 498 aaKnown RBP27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 HOXB13Q92826 284 aaPredicted RBP27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 SDF2Q99470 211 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 MRPS26Q9BYN8 205 aaKnown RBP27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 SLC13A4Q9UKG4 626 aa27.16■■□□□ 1.94
CTDNEP1-208ENST00000573600 WDR45Q9Y484 360 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms