RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 SRD5A2P31213 254 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 LHX2P50458 406 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 NEK2P51955 445 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 CAV1Q03135 178 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 WHAMMP3Q1A5X7 153 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 OR2A2Q6IF42 318 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 C8orf74Q6P047 294 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 PAGE2Q7Z2X7 111 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 WDSUB1Q8N9V3 476 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 SPATA3Q8NHX4 192 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 RDH11Q8TC12 318 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 FBXO25Q8TCJ0 367 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 CTHRC1Q96CG8 243 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 NXNL1Q96CM4 212 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 TMCO6Q96DC7 493 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 WFIKKN1Q96NZ8 548 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 MED18Q9BUE0 208 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 ITPAQ9BY32 194 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 BRINP2Q9C0B6 783 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 UBTD1Q9HAC8 227 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 ACOT9Q9Y305 439 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 RNF11Q9Y3C5 154 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 TNPO3Q9Y5L0 923 aaKnown RBP17.22■□□□□ 0.35
SCARF1-204ENST00000570902 UGT2B11O75310 529 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 GUCY1B2O75343 617 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 SMNDC1O75940 238 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCARF1-204ENST00000570902 ATP1B1P05026 303 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 KLK1P06870 262 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 ZNF708P17019 499 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 CRYGSP22914 178 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 CNTFP26441 200 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 FAM27E3Q08E93 113 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 MAP4K2Q12851 820 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 FAM83EQ2M2I3 478 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 PRICKLE4Q2TBC4 344 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 C10orf62Q5T681 223 aaPredicted RBP17.21■□□□□ 0.35
SCARF1-204ENST00000570902 DESI1Q6ICB0 168 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 METTL2BQ6P1Q9 378 aaKnown RBP17.21■□□□□ 0.35
SCARF1-204ENST00000570902 PLXDC2Q6UX71 529 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 ZDHHC24Q6UX98 284 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 CHMP1BQ7LBR1 199 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 P4HA3Q7Z4N8 544 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 GOLGA7Q7Z5G4 137 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 PLCZ1Q86YW0 608 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 PIK3IP1Q96FE7 263 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 PERPQ96FX8 193 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 SFXN2Q96NB2 322 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 LRRC1Q9BTT6 524 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 KLHL28Q9NXS3 571 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 PRODH2Q9UF12 536 aa17.21■□□□□ 0.35
SCARF1-204ENST00000570902 MRPS18CQ9Y3D5 142 aaKnown RBP17.21■□□□□ 0.35
SCARF1-204ENST00000570902 A0A087X1B8 175 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 ESYT3A0FGR9 886 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 SIAH2O43255 324 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 HCRTR2O43614 444 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 CLDN9O95484 217 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 CSNK2A2P19784 350 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-204ENST00000570902 DRD5P21918 477 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 DEKP35659 375 aaKnown RBP17.2■□□□□ 0.34
SCARF1-204ENST00000570902 CD79BP40259 229 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 ARL1P40616 181 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-204ENST00000570902 STARP49675 285 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 CLDN18P56856 261 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 HMGCS1Q01581 520 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 CCNYL2Q5T2Q4 361 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 CXXC5Q7LFL8 322 aaKnown RBP17.2■□□□□ 0.34
SCARF1-204ENST00000570902 GBP7Q8N8V2 638 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-204ENST00000570902 STARD4Q96DR4 205 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 FAM111AQ96PZ2 611 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 SLC39A3Q9BRY0 314 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 ELOVL5Q9NYP7 299 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 MAT2BQ9NZL9 334 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 EHD3Q9NZN3 535 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 ZNF639Q9UID6 485 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 PCDHA9Q9Y5H5 950 aa17.2■□□□□ 0.34
SCARF1-204ENST00000570902 C1orf226A1L170 272 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 TRIM64A6NGJ6 449 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 TRIM64BA6NI03 449 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 OR6C70A6NIJ9 312 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 INAFM1C9JVW0 142 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 KIF2AO00139 706 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-204ENST00000570902 TO15178 435 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 ABCB7O75027 752 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 TGM6O95932 706 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 PPICP45877 212 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 MAPK12P53778 367 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 GPX6P59796 221 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 MGAT2Q10469 447 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 NAB1Q13506 487 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 EXOSC7Q15024 291 aaKnown RBP17.19■□□□□ 0.34
SCARF1-204ENST00000570902 ACAP2Q15057 778 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 BCL2A1Q16548 175 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 SLC48A1Q6P1K1 146 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 FAM111BQ6SJ93 734 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 CENPLQ8N0S6 344 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-204ENST00000570902 CNEP1R1Q8N9A8 125 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 ADCY4Q8NFM4 1077 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 TRPC4APQ8TEL6 797 aa17.19■□□□□ 0.34
SCARF1-204ENST00000570902 KCTD4Q8WVF5 259 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms