RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 LGI1O95970 557 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 ADORA3P0DMS8 318 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 IRF1P10914 325 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 GANABQ14697 944 aaKnown RBP6.78□□□□□ -1.32
CNOT1-216ENST00000569240 AMHR2Q16671 573 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 TNS2Q63HR2 1409 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 FRMPD2BQ6IN97 320 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 KDM8Q8N371 416 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 RSC1A1Q92681 617 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 TMEM175Q9BSA9 504 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 OSGEPL1Q9H4B0 414 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 PCDHGA2Q9Y5H1 932 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 NFKBIEO00221 500 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 TIA1P31483 386 aaKnown RBP eCLIP6.78□□□□□ -1.321e-6■■□□□ 11.4
CNOT1-216ENST00000569240 MAN2A2P49641 1150 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 CCR8P51685 355 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 DIO3P55073 304 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 NKX3-2P78367 333 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 SLAMF1Q13291 335 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF266Q14584 549 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 ATXN7L3Q14CW9 347 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-216ENST00000569240 B3GNTL1Q67FW5 361 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-216ENST00000569240 OPN5Q6U736 354 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 TEX261Q6UWH6 196 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 SGPP2Q8IWX5 399 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF101Q8IZC7 436 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 SLC5A8Q8N695 610 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 C12orf29Q8N999 325 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 GIMAP1Q8WWP7 306 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 EDAQ92838 391 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 MAL2Q969L2 176 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 SFXN2Q96NB2 322 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 HIST1H2AAQ96QV6 131 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 SYT11Q9BT88 431 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 TTPALQ9BTX7 342 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 OR11A1Q9GZK7 315 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 APOBEC3GQ9HC16 384 aaKnown RBP6.78□□□□□ -1.32
CNOT1-216ENST00000569240 THSD1Q9NS62 852 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 COLEC10Q9Y6Z7 277 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 U3KQ87 197 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 TCHHQ07283 1943 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 MYOM1P52179 1685 aa6.78□□□□□ -1.32
CNOT1-216ENST00000569240 PSMD9O00233 223 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 CSTBP04080 98 aaKnown RBP6.77□□□□□ -1.32
CNOT1-216ENST00000569240 ALDH2P05091 517 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 IL5P05113 134 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 MMP7P09237 267 aaPredicted RBP6.77□□□□□ -1.32
CNOT1-216ENST00000569240 TUBG1P23258 451 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 IDUAP35475 653 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 HSD11B2P80365 405 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 AAK1Q2M2I8 961 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 CELF3Q5SZQ8 465 aaKnown RBP6.77□□□□□ -1.32
CNOT1-216ENST00000569240 WSCD1Q658N2 575 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 CLEC10AQ8IUN9 316 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 GLB1L2Q8IW92 636 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 JAGN1Q8N5M9 183 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 OR5M3Q8NGP4 307 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 OR2A12Q8NGT7 310 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 OR6K6Q8NGW6 343 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 FERD3LQ96RJ6 166 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 BABAM2Q9NXR7 383 aa6.77□□□□□ -1.32
CNOT1-216ENST00000569240 SNRNP70P08621 437 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 CNR2P34972 360 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PDSS1Q5T2R2 415 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 LETMD1Q6P1Q0 360 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF704Q6ZNC4 412 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 TMUB2Q71RG4 321 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 GALNTL5Q7Z4T8 443 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ASPGQ86U10 573 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 FOXRED2Q8IWF2 684 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 C15orf54Q8N8G6 183 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 C1orf127Q8N9H9 656 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 FBXO15Q8NCQ5 510 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ANKK1Q8NFD2 765 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 OR2T4Q8NH00 348 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 C1orf74Q96LT6 269 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PGLYRP2Q96PD5 576 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PKMYT1Q99640 499 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 FGFBP2Q9BYJ0 223 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ACTL8Q9H568 366 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 KCNIP2Q9NS61 270 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SEMA4GQ9NTN9 838 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 GSKIPQ9P0R6 139 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 LOC105369274A0A096LPK9 316 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 GRM6O15303 877 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SYT7O43581 403 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 POP4O95707 220 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ITGB5P18084 799 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 AVPR1BP47901 424 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 RNF4P78317 190 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 FAM98CQ17RN3 349 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 DALRD3Q5D0E6 543 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SHFQ7M4L6 423 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 THOC6Q86W42 341 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 IGDCC3Q8IVU1 814 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 OR4N4Q8N0Y3 316 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 KIAA1958Q8N8K9 716 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 OR51G2Q8NGK0 314 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 RAET1EQ8TD07 263 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms