RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 P4HA3Q7Z4N8 544 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 NUDT13Q86X67 352 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 PPM1NQ8N819 430 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 OR52B6Q8NGF0 335 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 OR52R1Q8NGF1 315 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 WDR20Q8TBZ3 569 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 TMBIM1Q969X1 311 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 PGM2Q96G03 612 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 BDH2Q9BUT1 245 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 MAT2BQ9NZL9 334 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 FLRT3Q9NZU0 649 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 NDRG3Q9UGV2 375 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 CR1P17927 2039 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 ABCA1O95477 2261 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 FAM171A2A8MVW0 826 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 SHISA8B8ZZ34 492 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 SEC14L5O43304 696 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 ERAL1O75616 437 aaKnown RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 THBDP07204 575 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 PCSK2P16519 638 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 ZNF708P17019 499 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 CRYGSP22914 178 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 KIR2DL2P43627 348 aaPredicted RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 TMED10P49755 219 aaKnown RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 SUCLG1P53597 346 aaKnown RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 CORO7P57737 925 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 B3GALT5-AS1P59052 145 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 SF3B4Q15427 424 aaKnown RBP eCLIP13.42□□□□□ -0.26
USB1-214ENST00000568848 EXOC3L2Q2M3D2 409 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 PRICKLE4Q2TBC4 344 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 UBAP2Q5T6F2 1119 aaKnown RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 ALKBH2Q6NS38 261 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 PHC2Q8IXK0 858 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 CENPLQ8N0S6 344 aaPredicted RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 ZNF610Q8N9Z0 462 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 OR4K14Q8NGD5 310 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 STAG3L4Q8TBR4 150 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 PYROXD1Q8WU10 500 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 PIGTQ969N2 578 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 ZNF845Q96IR2 970 aaPredicted RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 NSUN5Q96P11 429 aaKnown RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 SECISBP2Q96T21 854 aaKnown RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 PIP5K1AQ99755 562 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 PIGMQ9H3S5 423 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 WDR41Q9HAD4 459 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 FARSBQ9NSD9 589 aaKnown RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 FETUBQ9UGM5 382 aa13.42□□□□□ -0.26
USB1-214ENST00000568848 EXO1Q9UQ84 846 aaKnown RBP13.42□□□□□ -0.26
USB1-214ENST00000568848 A0A087X1B8 175 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 FAM159BA6NKW6 160 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 OR7A17O14581 309 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 GMFGO60234 142 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 ZIC3O60481 467 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 POU2F1P14859 743 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 TSPAN8P19075 237 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 PTX3P26022 381 aaPredicted RBP13.41□□□□□ -0.26
USB1-214ENST00000568848 SERPINB1P30740 379 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 CASQ1P31415 396 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 GALNSP34059 522 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 UGT2B10P36537 528 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 GP5P40197 560 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 CD79BP40259 229 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 ARL1P40616 181 aaPredicted RBP13.41□□□□□ -0.26
USB1-214ENST00000568848 MC3RP41968 323 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 DIO3P55073 304 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 HMGCS1Q01581 520 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 C2orf54Q08AI8 447 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 TNK1Q13470 666 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 GTF2H2Q13888 395 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 SLC30A6Q6NXT4 461 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 GTF2H2CQ6P1K8 395 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 ENPP6Q6UWR7 440 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 NPSR1Q6W5P4 371 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 SYT10Q6XYQ8 523 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 OR4N2Q8NGD1 307 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 SPATA3Q8NHX4 192 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 LCORQ96JN0 433 aaPredicted RBP13.41□□□□□ -0.26
USB1-214ENST00000568848 ADOQ96SZ5 270 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 HBEGFQ99075 208 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 CPNE1Q99829 537 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 CENPKQ9BS16 269 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 RTN4RQ9BZR6 473 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 KLHL4Q9C0H6 718 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 IPPKQ9H8X2 491 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 NSMCE4AQ9NXX6 385 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 CPSF2Q9P2I0 782 aaKnown RBP13.41□□□□□ -0.26
USB1-214ENST00000568848 TXNDC16Q9P2K2 825 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 DKKL1Q9UK85 242 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 CES1P1Q9UKY3 287 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 CLEC4AQ9UMR7 237 aa13.41□□□□□ -0.26
USB1-214ENST00000568848 RNF223E7ERA6 249 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 H0YIV9 168 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 MSTNO14793 375 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 HCRTR2O43614 444 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 SCO2O43819 266 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 CRLF1O75462 422 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 REM1O75628 298 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 GOSR1O95249 250 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 LTA4HP09960 611 aaKnown RBP13.4□□□□□ -0.26
USB1-214ENST00000568848 GFAPP14136 432 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms