RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 VSX2P58304 361 aaPredicted RBP16.99■□□□□ 0.31
SMPD3-211ENST00000568373 FZD5Q13467 585 aa16.99■□□□□ 0.31
SMPD3-211ENST00000568373 COL9A2Q14055 689 aaPredicted RBP16.99■□□□□ 0.31
SMPD3-211ENST00000568373 ZNF311Q5JNZ3 666 aa16.99■□□□□ 0.31
SMPD3-211ENST00000568373 SH3GL3Q99963 347 aa16.99■□□□□ 0.31
SMPD3-211ENST00000568373 MAN2C1Q9NTJ4 1040 aa16.99■□□□□ 0.31
SMPD3-211ENST00000568373 CYR61O00622 381 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ST6GAL1P15907 406 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ZNF182P17025 639 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-211ENST00000568373 CD27P26842 260 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 POU1F1P28069 291 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 HPCAP84074 193 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ILKQ13418 452 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ZNF628Q5EBL2 1059 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 PODNL1Q6PEZ8 512 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 OR5T3Q8NGG3 340 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 GAB3Q8WWW8 586 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 MYDGFQ969H8 173 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ZG16BQ96DA0 208 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 IL21RQ9HBE5 538 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 FAM60AQ9NP50 221 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 AMBNQ9NP70 447 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 SLC6A14Q9UN76 642 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 M0R129 80 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 HCRTR1O43613 425 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 MPZL2O60487 215 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 SLITRK5O94991 958 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ZIC2O95409 532 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-211ENST00000568373 CSF2P04141 144 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 WNT1P04628 370 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 PSMB9P28065 219 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 CNR2P34972 360 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 SOX18P35713 384 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ST13P50502 369 aaKnown RBP16.98■□□□□ 0.31
SMPD3-211ENST00000568373 PDX1P52945 283 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 MAZP56270 477 aaKnown RBP16.98■□□□□ 0.31
SMPD3-211ENST00000568373 SHC2P98077 582 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ID2Q02363 134 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 UBXN2BQ14CS0 331 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 CTF1Q16619 201 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 VRK2Q86Y07 508 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 DEFB119Q8N690 84 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 SIMC1Q8NDZ2 872 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 GGHQ92820 318 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 CDS1Q92903 461 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 ARHGDIGQ99819 225 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 STARD5Q9NSY2 213 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 SLC13A4Q9UKG4 626 aa16.98■□□□□ 0.31
SMPD3-211ENST00000568373 FGF17O60258 216 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 TPST2O60704 377 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 LDB3O75112 727 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 BCAS1O75363 584 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 ATP1B1P05026 303 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 NUDT6P53370 316 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 TARDBPQ13148 414 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 ELOCQ15369 112 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 SHISA5Q8N114 240 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 CA13Q8N1Q1 262 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 LINC00471Q8N535 108 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 TMEM52Q8NDY8 209 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 SLC9A6Q92581 669 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 YIPF6Q96EC8 236 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 BCL7BQ9BQE9 202 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 POLR2J3Q9H1A7 115 aaKnown RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 C19orf53Q9UNZ5 99 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 MRPS17Q9Y2R5 130 aaKnown RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 MUC3AQ02505 3323 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 METTL12A8MUP2 240 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 FCMRO60667 390 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 GABARAPO95166 117 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 SOX14O95416 240 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 ZBTB11O95625 1053 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 GPR75O95800 540 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 BCL10O95999 233 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 CDK1P06493 297 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 FOSL2P15408 326 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 NME1P15531 152 aaKnown RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 CDH3P22223 829 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 CD38P28907 300 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 C21orf33P30042 268 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 PRKAR1BP31321 381 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 STT3AP46977 705 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 AQP6Q13520 282 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 TRMT12Q53H54 448 aaKnown RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 FHL5Q5TD97 284 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 UBE2UQ5VVX9 321 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 FRRS1Q6ZNA5 592 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 PTCHD4Q6ZW05 846 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 C19orf47Q8N9M1 422 aaKnown RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 FCGR1BQ92637 280 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 TANKQ92844 425 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 CHRDQ9H2X0 955 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 TRIM45Q9H8W5 580 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-211ENST00000568373 CHST2Q9Y4C5 530 aa16.97■□□□□ 0.31
SMPD3-211ENST00000568373 A0A1W2PR77 199 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 UBXN7O94888 489 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 NR4A1P22736 598 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 FASLGP48023 281 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 TBCEQ15813 527 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms