RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ANKRA2Q9H9E1 313 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 LIN28AQ9H9Z2 209 aaKnown RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 TIMMDC1Q9NPL8 285 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 EQTNQ9NQ60 294 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 ANKRD10Q9NXR5 420 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 NTMQ9P121 344 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 BTNL2Q9UIR0 455 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 MRTO4Q9UKD2 239 aaKnown RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 DTX4Q9Y2E6 619 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 KLF13Q9Y2Y9 288 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 OR10H1Q9Y4A9 318 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 SPTA1P02549 2419 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 TP53I11O14683 189 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 TO15178 435 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 NEURL1O76050 574 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 SOX30O94993 753 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 NADKO95544 446 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 FBXO45P0C2W1 286 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 NAGAP17050 411 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 ABCD3P28288 659 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 CCT3P49368 545 aaKnown RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 PRKAG1P54619 331 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 PSMD4P55036 377 aaKnown RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 WNT3P56703 355 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 HBA1P69905 142 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 MRPS22P82650 360 aaKnown RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 NNATQ16517 81 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 TIGD2Q4W5G0 525 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF766Q5HY98 468 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 CGB2Q6NT52 195 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 RPUSD3Q6P087 351 aaKnown RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 PAOXQ6QHF9 649 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 IL20RBQ6UXL0 311 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 C16orf47Q6ZP98 133 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 CPLX4Q7Z7G2 160 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 CLECL1Q8IZS7 167 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 SLC34A3Q8N130 599 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 OR9I1Q8NGQ6 314 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 LMF2Q9BU23 707 aaKnown RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 CXorf36Q9H7Y0 433 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 SIRT3Q9NTG7 399 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 CCDC167Q9P0B6 97 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 VPS4AQ9UN37 437 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 GPR55Q9Y2T6 319 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-208ENST00000567250 CSAG2Q9Y5P2 127 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 NPFFR2Q9Y5X5 522 aa11.24□□□□□ -0.61
SF3B3-208ENST00000567250 RNF103-CHMP3A0A140T963 221 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 CCDC154A6NI56 674 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 C9JVG2 144 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 NR5A2O00482 541 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 RFXANKO14593 260 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 NME2P1O60361 137 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 PPM1BO75688 479 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SORBS2O94875 1100 aaKnown RBP11.23□□□□□ -0.61
SF3B3-208ENST00000567250 OR6B1O95007 311 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 KCNH1O95259 989 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 ANP32DO95626 131 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 CPSF4O95639 269 aaKnown RBP11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SP1P08047 785 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 NME2P22392 152 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 UQCRC2P22695 453 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 IL12AP29459 219 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 IL12BP29460 328 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 ANXA11P50995 505 aaKnown RBP11.23□□□□□ -0.61
SF3B3-208ENST00000567250 DGKQP52824 942 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 NTRK2Q16620 822 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 CYP27C1Q4G0S4 372 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 TBCELQ5QJ74 424 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF468Q5VIY5 522 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SLC25A25Q6KCM7 469 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 MFSD12Q6NUT3 480 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 FAM180AQ6UWF9 173 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SPATA21Q7Z572 469 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 ANKRD46Q86W74 232 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SLC44A2Q8IWA5 706 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-208ENST00000567250 PSD4Q8NDX1 1056 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SIMC1Q8NDZ2 872 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 FAM13CQ8NE31 585 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 GOT1L1Q8NHS2 421 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-208ENST00000567250 C10orf82Q8WW14 230 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 JADE3Q92613 823 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 OMA1Q96E52 524 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SCMH1Q96GD3 660 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 ITCHQ96J02 903 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SLC35G5Q96KT7 338 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SIGLEC12Q96PQ1 595 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SECISBP2Q96T21 854 aaKnown RBP11.23□□□□□ -0.61
SF3B3-208ENST00000567250 SACM1LQ9NTJ5 587 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 CNIH4Q9P003 139 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 FAF1Q9UNN5 650 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-208ENST00000567250 PCDHGB3Q9Y5G1 929 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
SF3B3-208ENST00000567250 CFAP46Q8IYW2 2715 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 B8ZZF3 427 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 KLRC4-KLRK1H3BQV0 150 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 HS6ST1O60243 411 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 SCN2BO60939 215 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 RASAL1O95294 804 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms