RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 UMPSP11172 480 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 EMDP50402 254 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 ZNHIT3Q15649 155 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-213ENST00000565834 SYPL1Q16563 259 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 DUSP5Q16690 384 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 SFT2D3Q587I9 215 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 EXOSC6Q5RKV6 272 aaKnown RBP17.45■□□□□ 0.38
COMMD4-213ENST00000565834 TIPARPQ7Z3E1 657 aaKnown RBP17.45■□□□□ 0.38
COMMD4-213ENST00000565834 C16orf62Q7Z3J2 963 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 GALNT10Q86SR1 603 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 EID3Q8N140 333 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 SLC2A12Q8TD20 617 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 CANT1Q8WVQ1 401 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 CDS1Q92903 461 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 POP5Q969H6 163 aaKnown RBP17.45■□□□□ 0.38
COMMD4-213ENST00000565834 DUS3LQ96G46 650 aaKnown RBP17.45■□□□□ 0.38
COMMD4-213ENST00000565834 STACQ99469 402 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 B3GNT4Q9C0J1 378 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 OR8D2Q9GZM6 311 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 PIGUQ9H490 435 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 FOLH1BQ9HBA9 442 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 OLAHQ9NV23 265 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 C19orf25Q9UFG5 118 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-213ENST00000565834 ANAPC2Q9UJX6 822 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 LIPT1Q9Y234 373 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 PTRH2Q9Y3E5 179 aaKnown RBP17.45■□□□□ 0.38
COMMD4-213ENST00000565834 KCNE3Q9Y6H6 103 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 V9GYQ6 96 aa17.45■□□□□ 0.38
COMMD4-213ENST00000565834 PRAMEF27A3QJZ7 478 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 BRINP1O60477 761 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 DDAH2O95865 285 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 CLCN2P51788 898 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 CRISP3P54108 245 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 PCBP3P57721 371 aaKnown RBP17.44■□□□□ 0.38
COMMD4-213ENST00000565834 MAPK11Q15759 364 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 CCDC80Q76M96 950 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 MARCH9Q86YJ5 346 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 ADGRG5Q8IZF4 528 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 ESX1Q8N693 406 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 ZNF615Q8N8J6 731 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 ANKFN1Q8N957 763 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 POLR1BQ9H9Y6 1135 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 DUSP22Q9NRW4 184 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 GIN1Q9NXP7 522 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 PRODH2Q9UF12 536 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 RPS6KA6Q9UK32 745 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 SAMD4AQ9UPU9 718 aaKnown RBP17.44■□□□□ 0.38
COMMD4-213ENST00000565834 AURKCQ9UQB9 309 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 PCDHGB3Q9Y5G1 929 aa17.44■□□□□ 0.38
COMMD4-213ENST00000565834 H3BNX3 289 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 GCM2O75603 506 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-213ENST00000565834 PGM3O95394 542 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 CLPSP04118 112 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 SLC7A1P30825 629 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 MAP3K8P41279 467 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 GABREP78334 506 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 FUT5Q11128 374 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 GPAT3Q53EU6 434 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 RPS26P11Q5JNZ5 115 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-213ENST00000565834 TMEM205Q6UW68 189 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 RNF111Q6ZNA4 994 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 PATL1Q86TB9 770 aaKnown RBP17.43■□□□□ 0.38
COMMD4-213ENST00000565834 ENDOVQ8N8Q3 282 aaKnown RBP17.43■□□□□ 0.38
COMMD4-213ENST00000565834 MORN4Q8NDC4 146 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 C16orf52Q8NHV5 167 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 GPR151Q8TDV0 419 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 ZNF721Q8TF20 911 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 HOXB13Q92826 284 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-213ENST00000565834 VSTM2LQ96N03 204 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 LMF2Q9BU23 707 aaKnown RBP17.43■□□□□ 0.38
COMMD4-213ENST00000565834 CCM2LQ9NUG4 571 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-213ENST00000565834 CALML5Q9NZT1 146 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 COPS7AQ9UBW8 275 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 PADI2Q9Y2J8 665 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 AP4S1Q9Y587 144 aa17.43■□□□□ 0.38
COMMD4-213ENST00000565834 A8MVJ9 347 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 KLF7O75840 302 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-213ENST00000565834 SOX30O94993 753 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 ZNF682O95780 498 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 IFNA14P01570 189 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 IGKV3-11P04433 115 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 FOLR3P41439 243 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 SLC37A1P57057 533 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 CRB2Q5IJ48 1285 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 HEPHL1Q6MZM0 1159 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 ENPP6Q6UWR7 440 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 ZNF321PQ8N8H1 164 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 COX18Q8N8Q8 333 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 OR2Y1Q8NGV0 311 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 BBS10Q8TAM1 723 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 CT55Q8WUE5 264 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 SLCO4A1Q96BD0 722 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 RNF145Q96MT1 663 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 TRNT1Q96Q11 434 aaKnown RBP17.42■□□□□ 0.38
COMMD4-213ENST00000565834 SEPHS2Q99611 448 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 TREX2Q9BQ50 279 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-213ENST00000565834 EFHD1Q9BUP0 239 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 UGT2B28Q9BY64 529 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 ADPRHL2Q9NX46 363 aa17.42■□□□□ 0.38
COMMD4-213ENST00000565834 STX18Q9P2W9 335 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms