RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 PROCRQ9UNN8 238 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 DYRK1BQ9Y463 629 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 RNF115Q9Y4L5 304 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 PSAT1Q9Y617 370 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 SPACA6W5XKT8 324 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 DOCK7Q96N67 2140 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 LOC100289279A0A1B0GTE1 492 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 OR6C76A6NM76 312 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 CLOCKO15516 846 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 HCRTR2O43614 444 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 KIAA0513O60268 411 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 CD3EP07766 207 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 SNRPAP09012 282 aaKnown RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 NUDT17P0C025 328 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 IGHV4-31P0DP07 118 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 COL6A2P12110 1019 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 USF1P22415 310 aaPredicted RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 DPP4P27487 766 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 STARP49675 285 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 COMPP49747 757 aaPredicted RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 TMED10P49755 219 aaKnown RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 NRG3P56975 720 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 EEFSECP57772 596 aaKnown RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 SIRPAP78324 504 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 TIAL1Q01085 375 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 TGM3Q08188 693 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 BCL2A1Q16548 175 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 HLA-DQA1Q5Y7H0 255 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 PAQR3Q6TCH7 311 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 RNF111Q6ZNA4 994 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 TIFABQ6ZNK6 161 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 LCA5Q86VQ0 697 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 CPNE9Q8IYJ1 553 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 RIBC1Q8N443 379 aaPredicted RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 OR2L5Q8NG80 312 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 GIMAP7Q8NHV1 300 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 CD200R1Q8TD46 325 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 ZFAND2BQ8WV99 257 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 EEF1AKMT1Q8WVE0 214 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 CCT6BQ92526 530 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 PPWD1Q96BP3 646 aaKnown RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 C1orf159Q96HA4 380 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 FBXL20Q96IG2 436 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 CSF3RQ99062 836 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 PAFAH2Q99487 392 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 REXO4Q9GZR2 422 aaKnown RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 WWTR1Q9GZV5 400 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 AICDAQ9GZX7 198 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 SPNS1Q9H2V7 528 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 CHODLQ9H9P2 273 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 COPS7BQ9H9Q2 264 aaPredicted RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 LYRM4Q9HD34 91 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 SNX15Q9NRS6 342 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 FAIMQ9NVQ4 179 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 ARL15Q9NXU5 204 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 EXO1Q9UQ84 846 aaKnown RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 MED16Q9Y2X0 877 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 MTO1Q9Y2Z2 717 aaKnown RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 KCNE2Q9Y6J6 123 aa8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 V9GYY5 206 aaPredicted RBP8.15□□□□□ -1.1
VPS9D1-205ENST00000565452 FREM1Q5H8C1 2179 aa8.15□□□□□ -1.11
VPS9D1-205ENST00000565452 HEATR5AQ86XA9 2040 aa8.15□□□□□ -1.11
VPS9D1-205ENST00000565452 CR1P17927 2039 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 UQCRHLA0A096LP55 91 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 C2orf92A0A1B0GVN3 265 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ANKDD1BA6NHY2 528 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 POC1B-GALNT4F8VUJ3 575 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ENO2P09104 434 aaPredicted RBP8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ZNF16P17020 682 aaPredicted RBP8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ITGA2P17301 1181 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 KRT15P19012 456 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 GSTM2P28161 218 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 HSD17B3P37058 310 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 LHX2P50458 406 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 CDKN2DP55273 166 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 GFRA1P56159 465 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 AP1S2P56377 157 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 TAS2R39P59534 338 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 RAB10P61026 200 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ATP6V0D1P61421 351 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ID2Q02363 134 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 RAB35Q15286 201 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ZNF672Q499Z4 452 aaPredicted RBP8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 CDKL4Q5MAI5 379 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 RBM20Q5T481 1227 aaKnown RBP8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 HIST2H2BDQ6DRA6 164 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ALKBH2Q6NS38 261 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 SLC30A6Q6NXT4 461 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ANGPTL8Q6UXH0 198 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 TMEM64Q6YI46 380 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 IFNEQ86WN2 208 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 MYO1HQ8N1T3 1032 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 RAB3IL1Q8TBN0 382 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ACMSDQ8TDX5 336 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 DCAKDQ8WVC6 231 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 GCDHQ92947 438 aaPredicted RBP8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 UBXN10Q96LJ8 280 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 TSNARE1Q96NA8 513 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms