RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 RASL10AQ92737 203 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 TAF4BQ92750 862 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 BIRC7Q96CA5 298 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 RAB3CQ96E17 227 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 TSPAN18Q96SJ8 248 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 SOSTQ9BQB4 213 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 APOOQ9BUR5 198 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ST6GALNAC5Q9BVH7 336 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 GPR174Q9BXC1 333 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 RWDD1Q9H446 243 aaPredicted RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ROPN1Q9HAT0 212 aaPredicted RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 HPF1Q9NWY4 346 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 TAS2R3Q9NYW6 316 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 PAK5Q9P286 719 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 CIDEBQ9UHD4 219 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 KLK13Q9UKR3 277 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ZNF490Q9ULM2 529 aaPredicted RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 MRPL11Q9Y3B7 192 aaKnown RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 KLF2Q9Y5W3 355 aaPredicted RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 FKBP7Q9Y680 259 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 CDC42BPAQ5VT25 1732 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ARHGEF12Q9NZN5 1544 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 DAPK1P53355 1430 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 CAMSAP2Q08AD1 1489 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 CDK13Q14004 1512 aaKnown RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 MAGI3Q5TCQ9 1506 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 NPIPA5A0A0B4J1W7 369 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 A0A1B0GTH9 108 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 A0A1B0GU03 582 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 A0A1W2PPR1 153 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 NPIPA5E9PKD4 350 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 LGALS8O00214 317 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 PI15O43692 258 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 RANBP6O60518 1105 aaKnown RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 AKR7A3O95154 331 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 SAA4P35542 130 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 HERVK_113P63132 956 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ERVK-8P63133 956 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 HTD2P86397 168 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 FUT7Q11130 342 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 BNIP1Q12981 228 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 DPYSQ14117 519 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 LRIT3Q3SXY7 679 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ACSF3Q4G176 576 aaPredicted RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ATRAIDQ6UW56 229 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 LRRC49Q8IUZ0 686 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 CENPSQ8N2Z9 138 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ZNF485Q8NCK3 441 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 C17orf47Q8NEP4 570 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 RBM18Q96H35 190 aaKnown RBP3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ERVK-6Q9BXR3 956 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 GNB4Q9HAV0 340 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ADGRL4Q9HBW9 690 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 STARD5Q9NSY2 213 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 FZR1Q9UM11 496 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 STYXL1Q9Y6J8 313 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ARHGEF5Q12774 1597 aa3.76□□□□□ -1.81
LINC00560-201ENST00000564593 ABCC4O15439 1325 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 ATP8B3O60423 1300 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 PREX2Q70Z35 1606 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 ANKRD30AQ9BXX3 1397 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 MYO5CQ9NQX4 1742 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 NUP153P49790 1475 aaKnown RBP3.75□□□□□ -1.81
LINC00560-201ENST00000564593 RPRD2Q5VT52 1461 aaKnown RBP3.75□□□□□ -1.81
LINC00560-201ENST00000564593 PLEKHH2Q8IVE3 1493 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 DISP1Q96F81 1524 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 KDM5DQ9BY66 1539 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 RGSL1A5PLK6 1076 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 ACOD1A6NK06 481 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 MCF2LO15068 1137 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 PDE5AO76074 875 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 NUDT14O95848 222 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 PTPN6P29350 595 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 GPC3P51654 580 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 VCPP55072 806 aaKnown RBP3.75□□□□□ -1.81
LINC00560-201ENST00000564593 MTTPP55157 894 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 NAAAQ02083 359 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 SRYQ05066 204 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 PCK2Q16822 640 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 VWA2Q5GFL6 755 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 ZNF506Q5JVG8 444 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 TAF3Q5VWG9 929 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 RFWD3Q6PCD5 774 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 CATSPER4Q7RTX7 472 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 P4HA3Q7Z4N8 544 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 SLC25A42Q86VD7 318 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 SLC47A2Q86VL8 602 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 ZNF491Q8N8L2 437 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 OR52B4Q8NGK2 314 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 OR52J3Q8NH60 311 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 CCDC110Q8TBZ0 833 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 LHX4Q969G2 390 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 NTNG2Q96CW9 530 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 ATOH8Q96SQ7 321 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 PSMB7Q99436 277 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 WRAP53Q9BUR4 548 aaKnown RBP3.75□□□□□ -1.81
LINC00560-201ENST00000564593 TRIM6Q9C030 488 aaPredicted RBP3.75□□□□□ -1.81
LINC00560-201ENST00000564593 YAE1D1Q9NRH1 226 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 ABCC13Q9NSE7 274 aa3.75□□□□□ -1.81
LINC00560-201ENST00000564593 ZNF446Q9NWS9 450 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms